LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr351g0055	ATGGATAACTTAGCATTGGACATCGTTCACAGATGGAACTCCGAGGAAGCCCGAAAGAAGATGATCTTCGCCGGCGACCGGCAAGAGGCGGAGTGCTACCTCCAAGCCGTCGATGAAATCCAGCGCTCATACGACGAGAGCGCCATCGCCATCGCCATGTCACGCTTGCGAAACGAATTCCGTAACATCCTAATCTCCCGCGCCAACCCCACTTCCTTCCTTCACCATCTCAACACCGAAGAAGAAAAAGAAGAAGAACCCCAACAGGGTTGTTGTGCTGGCTTCAGTCATCGACGCTTTAACGGTTCACCTTCAGCAAAACGACATGATGCTGCTGATGAACTTCTTTCTTTTGTCAACTTGGAGGAGATGGGTGTGATAACTTTTAGTGTTGATGCTATAAACGACCTGCGTTGCATTGCGGAAAGGATGATATCGTCAGGGTACTTGTGGCAGTGCATAGAGGTTTATGGCACTGTGAGGAAATCCATTATCGATGCCACCCTTCAGAGGCTGGGCATCGGTTATGTTCAGCGAGACCAGCTTCCGCCTGACACAAGGATCCACATCTGGAGAGAAGCAGCTAGGGTCAGTGTTCTCATCTTGTTCGCCCGCGAGAAGAGGCTTTGTGAGGAAATCTTTGAAGGCGTTGGTCCTGATATTGCTCATGCTTCCTTCATGGAGACGGCCAAAGAAGCTGCCATTCAGCTTCTCAAATTTGCTGACGCTATTTTCACAAGCACGACCTCATCGCCTCAGAAGCTGTTCAGGATTCTAGACCTGTATCAAGCTTTGGCTGATTTGATACCTCATTTTGATAATATCTTTGACCATAAATCATGTTATCCCATACGTATTCTCGCTGCTGATGTTCTGTCTTGCTTGTCTGAGGCTGCAAGGGACACTTTCTTCCAGTTTGAAAATTCTGTGCTTGGGGACACATCTGAGTCTGAGATTCCTATCCCTGCAAATGGGATAATTCACCCCTTGACCATTTATGTGATGGATAATTTAAGTTTTATCTGTGATTACAAACAAACTTTGGATGACCTTATAGTGCCTAAGCCATCAATGGAGTCTATTTTCACCCCTGATAAGCATTTTGCCCAAGAAGAAGGGGAAACCCGCTTGACTATTTACTTAACTTCTATTATTGAGACGTTGCTAATTAAGTTGGATGGTAAGTGCAAACAATATAAGGTCGAGTCTTTGTCTCATCTGTTCACGATGAACAATGCCCATTACATTTTTAAAAGGGTGAGAGGGCATTCTAAATTGAGGGACATAATTGGAGATGGTTATTTGAAAAAGCTGGAGAGAAAATTCCAGCAGGCTGCTATTAGCTACGAGAAATCAACTTGGGGGAGGGTGTTGGAGTGTTTAACGGAGGAGGGATTGTATTTGAAAAAAGGTGGTTGGGGGAGGGTGTTTGATTGTTTAACAGGGGGGGGATTATATTTGAAAAAAGGTGGCAAGATGTCAATCTCAAACTTAAAGGCCTTCACTGTCTTGTTTGAGAAGGTTCATAGGACTCAGGCTGTCTGGTCAATACCGGATTTACAACTCAGAAGTAGCCTTCAAATGTCTATAACACAGAAGCTGATCCCAGCGTATAAGTCATTTGTAAGGCGGCATGGGAACATCAAATTGGGCTACGTTAAGTATTCTGAGCTGGACCTGAATGCTGCTGTTTTGGATCTTTTCAAAGGAAAATCTATTTCCTAA	1725	0.447	MDNLALDIVHRWNSEEARKKMIFAGDRQEAECYLQAVDEIQRSYDESAIAIAMSRLRNEFRNILISRANPTSFLHHLNTEEEKEEEPQQGCCAGFSHRRFNGSPSAKRHDAADELLSFVNLEEMGVITFSVDAINDLRCIAERMISSGYLWQCIEVYGTVRKSIIDATLQRLGIGYVQRDQLPPDTRIHIWREAARVSVLILFAREKRLCEEIFEGVGPDIAHASFMETAKEAAIQLLKFADAIFTSTTSSPQKLFRILDLYQALADLIPHFDNIFDHKSCYPIRILAADVLSCLSEAARDTFFQFENSVLGDTSESEIPIPANGIIHPLTIYVMDNLSFICDYKQTLDDLIVPKPSMESIFTPDKHFAQEEGETRLTIYLTSIIETLLIKLDGKCKQYKVESLSHLFTMNNAHYIFKRVRGHSKLRDIIGDGYLKKLERKFQQAAISYEKSTWGRVLECLTEEGLYLKKGGWGRVFDCLTGGGLYLKKGGKMSISNLKAFTVLFEKVHRTQAVWSIPDLQLRSSLQMSITQKLIPAYKSFVRRHGNIKLGYVKYSELDLNAAVLDLFKGKSIS*	575

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr351g0055	574	Pfam	Exo70 exocyst complex subunit	191	563	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Apr351g0055	574	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	7	572	IPR004140	GO:0000145\|GO:0006887
	Apr351g0055	574	SUPERFAMILY	Cullin repeat-like	12	568	IPR016159	-
	Apr351g0055	574	Gene3D	Exocyst complex component Exo70	7	574	-	-
	Apr351g0055	574	PANTHER	EXOCYST SUBUNIT EXO70 FAMILY PROTEIN	7	572	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr351g0055	8	570	EXO70 exocyst subunit family	AT3G14090	40.523	5.46e-127	384

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr351g0055	K07195		-	aprc:113857249	1125.54