Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0052 ATGATTCAAAATGGATGCATTGCATCCCAAGGGTGTGCCCCTGTGAATTCTAGGTCATGCAACCTTGTCATACCAACTACCTCAGTCTTTCGTTGCGCTTCTCGGATGCCTGCTAAGGTTGCCGTCTCAAACATTCGTAGCTTTTGGGGACATAATTTAGAATGTAAATCCTACTTGCCAAGAGGAATGGCATTCTCAGACATTTCTGCTGCTTCAAGCCTGCTTTTAAGTGGGGGTCAAAATCTTCTCTTTCGCACTATCCCTATGTTACCCCGGGTGCGCAAGTCTTATTTGGTCCCTCGAGCATCGAAGGATGTCCCAACTAGCTTCCGTTATCCTCCAATGACCAAAAAACCGAGATGGTGGTGGAGATCATTAGCTTGCCTTCCTTACCTCATGCCACTTCATGAGACATGGATGTATGCTGAGACAGCATACAATCTTCACCCGTTTTTGGAATGCTTTGAATTCTATACGTACCCTTTTCTTATGGCAATTGGGAGCCTACCAAGCTGGTTTCTCATGGCATACTTTTTTGTTGCATATCTTGGCATTGTGAGGAGAAAAGAATGGCCTCATTTCTTCAGATTTCATGTTGTGATGGGAATGTTATTGGAGATTGCCCTGCAGGTTATAGGGACTGTGAGCCGTTGGATGCCACTGTCAGTCTACTGGGGTAAACTGGGAATGCATTTCTGGACTGCTGTGTCATTTGGGTATCTCTTTACTGTCTTGGAGTGCATAAGGTGTGCTCTTGTTGGTATTTATGCTGATATTCCATTTATCTGTGACGCAGCATATATCCAAATACCATATGATTAA 822 0.4416 MIQNGCIASQGCAPVNSRSCNLVIPTTSVFRCASRMPAKVAVSNIRSFWGHNLECKSYLPRGMAFSDISAASSLLLSGGQNLLFRTIPMLPRVRKSYLVPRASKDVPTSFRYPPMTKKPRWWWRSLACLPYLMPLHETWMYAETAYNLHPFLECFEFYTYPFLMAIGSLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSVYWGKLGMHFWTAVSFGYLFTVLECIRCALVGIYADIPFICDAAYIQIPYD* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0052 273 PANTHER HIT-TYPE ZINC FINGER FAMILY PROTEIN-RELATED 1 273 - -
Apr351g0052 273 Pfam Chloroplast import apparatus Tic20-like 93 266 IPR005691 -
Apr351g0052 273 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 1 273 IPR005691 -
Apr351g0052 273 TIGRFAM 3a0901s05TIC20: chloroplast protein import component, Tic20 family 1 273 IPR005691 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0052 65 273 Chloroplast and Mitochondria Gene Families AT4G03320 40.094 7.03e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0052 - - gmx:100818669 512.301