Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0046 ATGGCGCAGGCAAAAGAGCTCCAACAGGTTCAATGTTTCGGTCGCAAGAAAACCGCAGTGGCCGTCACATACTGCAAGCGCGGTCGCGGCTTGATCAAGATCAACGGTTGCCCCATCGAGCTGATCGAACCAGAAATTCTCCGGTTCAAGGCCTTCGAACCCATCCTTCTATTGGGGAAGCACCGGTTCGCCGGCGTTGACATGCGAATCCGCGTGAAAGGCGGTGGCCACACCTCACAGATTTACGCTATTCGCCAAAGCATTGCGAAGGCTCTCGTTGCGTTCTACCAGAAGTACGTTGATGAACAGAGCAAGAAGGAGATCAAGGACATCCTCGTACGATACGATCGCACCTTGCTTGTTGCTGATCCCAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGTGGCGCTCGCGCTAGGTTTCAGAAGTCTTACCGTTGA 441 0.5465 MAQAKELQQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRFKAFEPILLLGKHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0046 146 SUPERFAMILY Ribosomal protein S5 domain 2-like 9 146 IPR020568 -
Apr351g0046 146 Pfam Ribosomal protein S9/S16 14 146 IPR000754 GO:0003735|GO:0005840|GO:0006412
Apr351g0046 146 PANTHER RIBOSOMAL PROTEIN S9 4 146 IPR000754 GO:0003735|GO:0005840|GO:0006412
Apr351g0046 146 PANTHER - 4 146 - -
Apr351g0046 146 ProSitePatterns Ribosomal protein S9 signature. 74 92 IPR020574 GO:0003735|GO:0005840|GO:0006412
Apr351g0046 146 Gene3D - 1 146 IPR014721 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0046 1 146 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 86.986 1.13e-93 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0046 K02960 - gmx:100816874 278.485