Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0041 ATGGATTTCTGGCCAGAGTTTCTTGCAAGCAGTTCGGGAAGAGAGTTTGTGGCAGGTGGCCTTGGAGGCACTGCTGGTATAATCTCTGGTTATCCATTAGATACCCTTCGCATCAGATTACAGAACACCAAAAATGGCTCTGCCTTCACCATCCTTAGACACATGGTATCTAGGGAAGGACCAACTTCTCTGTACCGTGGCATGGGCGCACCACTGGCTTCTGTTACTTTTCAGAACGCTTTAGTTTTTCAAACGTACGCAATTCTGTCAAGGGCATTTGACTCCTCCGTTTCTGCCAAGGAACCTCCTTCCTACAAGGGTGTTGCTTTGGGAGGAGTTGGTACCGGGGCTCTTCAAAGCCTATTGCTTTCCCCTGTAGAGTTGGTTAAAGTTCGACTTCAGCTGCAGAACCAGGGGCAGACGACAGAATCTGGAAAAGGTCCTTTAAGGGTCGCTAAAAATATATGGAGAAAAGAGGGCTTTCGAGGCATCTATAGAGGACTTGGCATCACTGTGATGAGGGATGCACCTTCTCATGGTTTATATTTCTGGACATACGAATACATGAGGGAACGGTTACACCCAGGTTGCAGAAAAAGTGGCCAAGAAAGATTGAACACTATGTTAATAGCTGGAGGATTAGCTGGGGTAGCGAGTTGGATTATTTGCTACCCTTTAGATGTTGTCAAGACAAGACTACAGGCTCAAACGCCCTCTTCTCTCAAGTACAAAGGCATTTTTGACTGCTTCAAAAAGAGCATTAATGAAGAAGGGTACTGTGTGCTATGGCGGGGTCTAGGAACTGCTGTTGCAAGAGCGTTCTTAGTGAACGGTGCCATATTTTCTGCTTATGAAATTTCACTAAGATTACTGTTTAACAATGGAAGTATTCCAATGCAGGAAACAATTTAG 912 0.4518 MDFWPEFLASSSGREFVAGGLGGTAGIISGYPLDTLRIRLQNTKNGSAFTILRHMVSREGPTSLYRGMGAPLASVTFQNALVFQTYAILSRAFDSSVSAKEPPSYKGVALGGVGTGALQSLLLSPVELVKVRLQLQNQGQTTESGKGPLRVAKNIWRKEGFRGIYRGLGITVMRDAPSHGLYFWTYEYMRERLHPGCRKSGQERLNTMLIAGGLAGVASWIICYPLDVVKTRLQAQTPSSLKYKGIFDCFKKSINEEGYCVLWRGLGTAVARAFLVNGAIFSAYEISLRLLFNNGSIPMQETI* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0041 303 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 293 - -
Apr351g0041 303 SUPERFAMILY Mitochondrial carrier 14 285 IPR023395 -
Apr351g0041 303 Pfam Mitochondrial carrier protein 110 193 IPR018108 -
Apr351g0041 303 Pfam Mitochondrial carrier protein 208 294 IPR018108 -
Apr351g0041 303 Pfam Mitochondrial carrier protein 12 93 IPR018108 -
Apr351g0041 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Apr351g0041 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Apr351g0041 303 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 293 - -
Apr351g0041 303 Gene3D Mitochondrial carrier domain 12 296 IPR023395 -
Apr351g0041 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Apr351g0041 303 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Apr351g0041 303 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Apr351g0041 303 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Apr351g0041 303 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Apr351g0041 303 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0041 1 298 Antiporters AT1G79900 71.906 1.06e-149 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0041 K15109 - gmx:100812056 535.028