Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0033 ATGTCGTCTCCGCCACCGGAGACCTCTCCCGCCACGAACTCCACTGCCTCTCCTCCTCCGCCGGAACCCTCTCCCGCAACTAACTCCACTGTCTCTCCTCCATCGCCGGCGGTCACCACCAATTCCACGCCGCCGCCGCCGCCGCCTTCGTCTATTCCGACGTCGTTTGAAACGGTTAACAATGGGTTGCAGAAGGGTACATTAAACGGAATAATCATCGGGGTTGTGTTGGGTTCAGTAGGCATGCTTATCATCGGGGGTATTTTCGTCTGCCTTTATAGGAATCGGAAAAGGAAGAGACACCAGAATAGCTACTCGCAACCGCCACGACAGAAAGCTGACTTGGCTGGTGGCCTACTTCAGCATTGGCAAGCCAGTGTTCCTCCAATGACAGATGGTAAAGTAGGCTTGCCGCCCAAGCCACCTGGGGGTTTAGTGAGTCAGCAACATTCATCTACTGGTCTCCCCACACCTGCCGTGATTTCTTCAAATACCAGCAGTAGTTTGGGGTCTGAGAAGCCATACATTCCCCCTTCTTCTGGCATTTCCTTGGCACTATCTCATAGCACTTTTTCATTGAACGAATTAGCAGTTGCAACAGATGGATTTTCCAGATCAAATCTTCTTGGTCAAGGTGGTTTTGGCTATGTCCACAAAGGAGTTCTTCCAAATGGAAAAATTGTTGCAGTTAAGCAGTTGAAATCTGAGAGTAGACAAGGGGAGCGTGAGTTCCATGCGGAAGTAGAGGTCATTAGCCGTGTACATCATAGACATCTTGTTTCCCTAGTTGGATACTGCATCTCAGACAGCCAAAGGATGCTTGTCTATGAGTTTGTGCCTAATGATACACTGGAATTTCATTTGCACGGAAAGGACAGACCATCTATGGACTGGTCCACTAGGATGAGGATTGCTACAGGATCTGCAAAAGGATTAGCATATCTGCATGAGGACTGTAATCCCAAAATCATACATCGTGACATCAAGGCATCTAATATCCTTCTTGATAATAATTTTGAGGCTAAGGTTGCAGATTTTGGGCTTGCGAAATTTTCATCAGACACAGAAACCCATGTTTCTACTCGAGTGATGGGAACTTTTGGATACATGGCTCCAGAATATGCTGCTAGTGGGAAACTCACTGAAAAGTCAGATGTTTTCTCCTTTGGTGTTGTGCTTTTGGAGTTGATTACTGGACGGAAACCTGTTGATAAAATGCAATCCTTCACAGATGACAGCATGGTTGAATGGGCAAGGCCTTTGCTGTCCCAAGCTTTAGAGAATGGCAACTTTAATGGACTTGTTGATCCACGATTGCCAACAAATTACAATCTTGATGAGATGATCCGAATGACTGCTTGTGCTGCAACTTGTGTGCGCCATTCAGCCAGGCTTCGGCCTCGAATGAGCCAGGTTGTTCGAGCTTTGGAAGGTAATATTTCTCTAGAAGATCTAAATGAGGGGAGCACACCAGGACACAGCAGAGTTTTTGGTTCCTTTGAGAGTTCCAATTATGATACTATTCAATACAGTGAAGACTTGAAGAAGTTCAGGAAGCTAGCACTGGAAAGCCAAGAGCAAGGCGCTAGCGAGTACAGTGGTCCCAGCAGTGAGTATGGTCAACATCCTTCTGTCTCGACCAGTTCAGGCCAGCAAAATACTCAGGAAATGGAAATGGGGAATGTGAAGGGTAGCAACCATGTTTCTGGGATGAGCTCTTGA 1722 0.4692 MSSPPPETSPATNSTASPPPPEPSPATNSTVSPPSPAVTTNSTPPPPPPSSIPTSFETVNNGLQKGTLNGIIIGVVLGSVGMLIIGGIFVCLYRNRKRKRHQNSYSQPPRQKADLAGGLLQHWQASVPPMTDGKVGLPPKPPGGLVSQQHSSTGLPTPAVISSNTSSSLGSEKPYIPPSSGISLALSHSTFSLNELAVATDGFSRSNLLGQGGFGYVHKGVLPNGKIVAVKQLKSESRQGEREFHAEVEVISRVHHRHLVSLVGYCISDSQRMLVYEFVPNDTLEFHLHGKDRPSMDWSTRMRIATGSAKGLAYLHEDCNPKIIHRDIKASNILLDNNFEAKVADFGLAKFSSDTETHVSTRVMGTFGYMAPEYAASGKLTEKSDVFSFGVVLLELITGRKPVDKMQSFTDDSMVEWARPLLSQALENGNFNGLVDPRLPTNYNLDEMIRMTACAATCVRHSARLRPRMSQVVRALEGNISLEDLNEGSTPGHSRVFGSFESSNYDTIQYSEDLKKFRKLALESQEQGASEYSGPSSEYGQHPSVSTSSGQQNTQEMEMGNVKGSNHVSGMSS* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0033 573 ProSitePatterns Protein kinases ATP-binding region signature. 209 231 IPR017441 GO:0005524
Apr351g0033 573 SUPERFAMILY Protein kinase-like (PK-like) 176 476 IPR011009 -
Apr351g0033 573 MobiDBLite consensus disorder prediction 140 173 - -
Apr351g0033 573 MobiDBLite consensus disorder prediction 38 53 - -
Apr351g0033 573 MobiDBLite consensus disorder prediction 1 30 - -
Apr351g0033 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Apr351g0033 573 MobiDBLite consensus disorder prediction 1 58 - -
Apr351g0033 573 Gene3D Transferase(Phosphotransferase) domain 1 279 489 - -
Apr351g0033 573 MobiDBLite consensus disorder prediction 526 573 - -
Apr351g0033 573 SMART serkin_6 203 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0033 573 Gene3D Phosphorylase Kinase; domain 1 178 278 - -
Apr351g0033 573 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 7 549 - -
Apr351g0033 573 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 7 549 - -
Apr351g0033 573 MobiDBLite consensus disorder prediction 523 573 - -
Apr351g0033 573 MobiDBLite consensus disorder prediction 145 173 - -
Apr351g0033 573 Pfam Protein tyrosine and serine/threonine kinase 206 410 IPR001245 GO:0004672|GO:0006468
Apr351g0033 573 ProSiteProfiles Protein kinase domain profile. 203 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0033 13 522 Trihelix Transcription Factor Family AT1G70460 50.973 8.51e-163 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Apr351g0033 PK_Tyr_Ser-Thr 6.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0033 - - ccaj:109808169 865.144