Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0017 ATGATGGCTGGGAACCCTAACTGGTGGAGTATGCATCCACCATCTTTGATCCCTCCTCAGTATGTGCTTGGATCTTCTTCAATTCCCTTTAATTCTTCTACAGAAAACCCAGAACACCCTCAGTCATTGAGCCAACTTCTTTTCACTGGGTTACCAGGCGAAGAAGAGAGAGTTGCATTCAGTCATTTTCAATCAAAAAAGTTGGATAACTGGGATGAACATATTCTTAATCCATCCCCCATAGTGCATATGGCTGATGTAATAAAGCAAGAGGTTTCTCAAAGTGGCAGCTTATATCACCACGGGCATGATCAGGAATTTCAGGTTTCAGGAGCACCTTGGTCACATATGGTGGCAGTTTCTTCTTCTCCTAGGTCAAGTGTCACTAGCTTGAGTAGTAATAATAATAATTTATTGGATTTCACTTATAACAAGACAGGTCATAGGAAGAACCAATTTCTAGATCACACATCCGATTGTAATAGCCAAGCCACTGCTGGAGTTTGTAAGAGGACTAAGAGTCAACCATCTTCAAGCCAACCCCCTCTCAAGGTGAGAAAGGAGAAGCTAGGTGATAGAATAACAGCCCTTCACCAGCTGGTTTCCCCATTCGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATCGGATACATAAGATTCCTTCAGGGTCAAATTGAGGCACTCAGTTCTCCTTACTTGGGCAATGGATCAAAAAACATTAGGAATCAACAATCTCAACAGGTACACGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACACTGGCCTGAAAAGAAAGGGAGCTCCAAGCCAGGATGCAGTAGATAAGCCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTAGTTCCTGTGTCTTGTACCCAACATGTGGGAAGTGAAAATGGAGCTGATTATTGGGCACCTGCTTATGGCAGTGGATTTTAA 966 0.4348 MMAGNPNWWSMHPPSLIPPQYVLGSSSIPFNSSTENPEHPQSLSQLLFTGLPGEEERVAFSHFQSKKLDNWDEHILNPSPIVHMADVIKQEVSQSGSLYHHGHDQEFQVSGAPWSHMVAVSSSPRSSVTSLSSNNNNLLDFTYNKTGHRKNQFLDHTSDCNSQATAGVCKRTKSQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNIRNQQSQQVHGERNSVFPEDPGQLLNDTGLKRKGAPSQDAVDKPKDLRSRGLCLVPVSCTQHVGSENGADYWAPAYGSGF* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0017 321 MobiDBLite consensus disorder prediction 240 285 - -
Apr351g0017 321 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 19 308 - -
Apr351g0017 321 MobiDBLite consensus disorder prediction 240 254 - -
Apr351g0017 321 CDD bHLH_AtbHLH_like 184 231 IPR045239 -
Apr351g0017 321 PANTHER OS05G0228400 PROTEIN 19 308 - -
Apr351g0017 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 184 235 IPR036638 GO:0046983
Apr351g0017 321 Gene3D - 184 249 IPR036638 GO:0046983
Apr351g0017 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 174 223 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0017 53 265 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.872 1.76e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0017 - - gmx:100802121 552.747