Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0014 ATGTCTACACCATTAGAACATGATTACATAGGCTTAGGAGAGTCTCCATCCATGGAGAAAAGCTGTGATAAGATATCCTCTTCAGTTTCCTCTAACCTCTCCTCTGAGGACGAAAACACTTCATCTCTCAACTTCAAGGAGACTGAGCTAAGGCTTGGCCTCCCAGGTTGTGACTCTCCTTGCAAAAACTCAGTACCTGGAATCTCTCTTTTTGGCAAGGATTTGCAGAACAAGCACAATGGCTATTCTGCTTCTTCAGCTCCTTCAAAGAACCTTGTGGCTGGGGCTAAGAGGGGCTTCTCTGATGCCATTGACGGTTCTTCTTCTGGGAAATGGATTTTCTCAGTGAGTGATGGAACTGAGGGCAATGGAGCTGCTTTGTTTTCCCCTATAGGCCTTGTTGTTTCAGAGGGTAAGCATAATAGCCTTCAGGCTAATACCTCTGTAGGAAGCAACAAAGAGGTTGGTAATGGTATGGTTCCTCAGTCTGAGAAGAAAGCTCACGAAAAGAAGCCTCAGGTTGATGCAACAAATGAGCATGGTAGAGCTCCTGCTTCCAAAGCACAAGTTGTAGGATGGCCACCAATCCGATCTTTTCGAAAGAACACGATGGCCTCTAATTTGGCAAAAAGCAATAACGAAGCTGAAGAGAAATCAGGAGTTGGTTGTCTTTATGTAAAGGTCAGCATGGATGGTGCCCCTTATCTCAGAAAGGTTGATCTGAAAACCTACGGCAACTATGTTGAACTTTCTTCTGCTCTTGAGAAAATGTTCAGCTGCTTTACCATAGGTCAATGCAGTTCTCGTGGAGTTCCTGGGAAAGATGGCTTAAGTGAGAGTGCCTTCAGGGATCTTCATGGCTCTGAATATGTTCTTACATATGAAGATAAAGATGGAGACTGGATGCTTGTGGGTGATGTCCCTTGGGAGATGTTTACTGAGTCATGTAAGAAACTAAGGATAATGAAAGGCTCTGAAGCAATCGGGTTAGCTCCAAGGTCCATGGAAAAATCTAGGAGCCAAAACTAA 1029 0.4431 MSTPLEHDYIGLGESPSMEKSCDKISSSVSSNLSSEDENTSSLNFKETELRLGLPGCDSPCKNSVPGISLFGKDLQNKHNGYSASSAPSKNLVAGAKRGFSDAIDGSSSGKWIFSVSDGTEGNGAALFSPIGLVVSEGKHNSLQANTSVGSNKEVGNGMVPQSEKKAHEKKPQVDATNEHGRAPASKAQVVGWPPIRSFRKNTMASNLAKSNNEAEEKSGVGCLYVKVSMDGAPYLRKVDLKTYGNYVELSSALEKMFSCFTIGQCSSRGVPGKDGLSESAFRDLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCKKLRIMKGSEAIGLAPRSMEKSRSQN* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0014 342 MobiDBLite consensus disorder prediction 163 177 - -
Apr351g0014 342 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 5 334 IPR003311 GO:0005634|GO:0006355
Apr351g0014 342 SUPERFAMILY CAD & PB1 domains 223 323 - -
Apr351g0014 342 PANTHER AUXIN-RESPONSIVE PROTEIN 5 334 - -
Apr351g0014 342 Pfam AUX/IAA family 47 333 IPR033389 -
Apr351g0014 342 Gene3D - 217 335 - -
Apr351g0014 342 MobiDBLite consensus disorder prediction 145 188 - -
Apr351g0014 342 MobiDBLite consensus disorder prediction 20 44 - -
Apr351g0014 342 MobiDBLite consensus disorder prediction 1 44 - -
Apr351g0014 342 ProSiteProfiles PB1 domain profile. 223 324 IPR000270 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0014 227 332 B3 DNA Binding Superfamily AT4G23980 31.132 6.11e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Apr351g0014 AUX_IAA 1.5e-89 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0014 K14484 - gmx:100804782 463.766