Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0004 ATGTCCTGCAAGGATGGTAGCAAAAACGGAATGGATAACGGAAAATATGTCCGTTACACACCTGAGCAGGTTGAAGCCCTTGAGAGGCTCTATCACGATTGCCCCAAACCTAGTTCCATTCGCCGTCAACAGCTTATACGTGAGTGTCCGATTCTCTCCAACATTGAGCCGAAGCAAATCAAGGTTTGGTTTCAGAATCGAAGATGTAGAGAGAAGCAGAGAAAAGAGGCGTCACGTTTGCAAGCTGTGAATAGGAAGTTGACTGCCATGAACAAGCTGCTGATGGAGGAGAATGATAGGTTGCAGAAGCAGGTGTCTCAACTGGTGTATGAAAATGGCTATTTTCGTCAACACACCCAAAATGCAACCAAAGACACAAGCTGTGAATCGGCTGTGACGAGTGGTCAGCGCAGTTTGACTACTCAACATCCCCCAAGGGATGCGAGTCCTGCAGGGCTTTTGTCCATTGCAGAAGAGACTCTAGCAGAATTTCTTTCTAAGGCTACTGGAACTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTCGCTATTTCTCATGGTTGCACTGGTGTGGCAGCAAGAGCCTGTGGTCTAGTGGGACTAGAACCCACGAGGGTTGCAGAAATCCTCAAAGATCGGCCTTTGTGGTTTCGCGATTGCCGAGCTGTTGATGTTCTCAATGTGCTGCCCACAGCAAACGGTGGAACCATTGAGCTGCTTTATATGCAGCTGTATGCACCAACGACATTGGCGCCTGCTCGAGACTTCTGGTTGTTGCGCTACACTTCTGTTTTAGAAGATGGCAGTCTAGTGATCTGTGAGAGGTCTCTTAAAAATACTCAAAACGGTCCAAGCATGCCTCCTGTGCAGCATTTTGTTAGAGCAGAGATGCTGCCTTGTGGGTACCTGATAAGACCTTGTGAAGGAGGTGGTTCCATCATCCACATTGTTGATCATATGGATTTAGAGCCTTGGAGTGTTCCAGAAGTGCTACGTCCACTGTATGAATCATCAACAGTGCTGGCTCAGAAGACAACTATGGCGGCCCTACGTCATCTAAGGCAGATTTCACATGAAGTTTCACAGTCTACTGTCACTGGGTGGGGTAGACGACCAGCAGCTCTACGAGCTCTTAGCCAGAGATTGAGCCGGGGTTTCAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGTCATTGATTGGCAATGATGGTGTAGATGATGTTACTATTCTAGTAAATTCATCCCCAGACAAGTTAATGGGTTTGAATCTTTCCTTTGCCAATGGATTTCCCTCTGTCAGTAATGCAGTGCTATGTGCTAAAGCATCAATGCTATTACAGAATGTGCCCCCAGCCATTCTCCTAAGGTTCCTGCGGGAGCATAGATCAGAATGGGCAGACAACAATATGGATGCTTATACAGCTGCTGCTATTAAAGTAGGCCCTTGCAGCTTCTCTGGATCTCGTATTGGAAATTACGGTGGTCAAGTTATACTCCCTCTAGCACACACAATTGAGCACGAGGAGTTTTTGGAAGTCATTAAATTGGAAGGGGTTGCTCATTGTCCTGAAGACACAATAATGCCCAGAGAAGTGTTTCTTTTGCAACTCTGCAGTGGAATGGATGAGAATGCTGTTGGCACTTGTGCTGAACTTATATTTGCTCCAATTGATGCTTCCTTTGCTGATGATGCCCCTCTTTTACCTTCTGGATTTCGCATCATTCCTCTTGAATCTGGAAAGGAAGCTTCCAGCCCTAATCGCACCCTTGACCTTGCATCTGCCCTGGACATTGGCCCAACTGGAAACAGAGCTTCAAATGATTATGCTGGAAATTCCAGCTGTATGAGATCTGTGATGACAATAGCATTTGAATTTGCATTTGAAAGCCATATGCAGGAGCATGTAGCATCTATGGCACGTCAATATGTTCGCAGCATTATATCATCAGTACAAAGGGTAGCATTAGCACTTTCTCCTTCTCATTTGAGTTCACATGCTGGGCTTAGGACACCATTGGGTACTCCTGAAGCACAAACCCTTGCTCATTGGATCTGCAACAGTTATAGGTGCTACTTGGGCGTGGAGCTACTTAAATCTAATAACGAGGGGAATGAATCTTTACTTAAGTCCTTGTGGCATCTCTCAGATGCAATATTGTGCTGCACTCTAAAGGCATTGCCAGTGTTCACTTTCTCAAACCAGGCTGGGCTTGACATGCTGGAGACTACCCTAGTTGCATTACAGGATATAACATTAGAGAAAATATTTGATGATCATGGACGAAAAATTCTCTTTTCAGAGTTTCCACAGATTATTCAACAGGGTTTTGCATGTCTTCAAGGTGGCATTTGTCTCTCTAGCATGGGGCGACCTGTCTCTTATGAAAGAGTTGTTGCATGGAAGGTGCTGAATGAAGAAGAGAACGCTCATTGTATTTGCTTTATGTTTGTAAACTGGTCTTTTGTTTGA 2502 0.4548 MSCKDGSKNGMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNATKDTSCESAVTSGQRSLTTQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPLWFRDCRAVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQHFVRAEMLPCGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRHLRQISHEVSQSTVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSLIGNDGVDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDAYTAAAIKVGPCSFSGSRIGNYGGQVILPLAHTIEHEEFLEVIKLEGVAHCPEDTIMPREVFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLESGKEASSPNRTLDLASALDIGPTGNRASNDYAGNSSCMRSVMTIAFEFAFESHMQEHVASMARQYVRSIISSVQRVALALSPSHLSSHAGLRTPLGTPEAQTLAHWICNSYRCYLGVELLKSNNEGNESLLKSLWHLSDAILCCTLKALPVFTFSNQAGLDMLETTLVALQDITLEKIFDDHGRKILFSEFPQIIQQGFACLQGGICLSSMGRPVSYERVVAWKVLNEEENAHCICFMFVNWSFV* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0004 833 CDD bZIP 67 106 - -
Apr351g0004 833 Pfam Homeodomain 15 73 IPR001356 GO:0003677
Apr351g0004 833 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 833 IPR044830 GO:0003700
Apr351g0004 833 Gene3D - 190 370 IPR023393 -
Apr351g0004 833 SMART START_1 155 365 IPR002913 GO:0008289
Apr351g0004 833 MobiDBLite consensus disorder prediction 121 145 - -
Apr351g0004 833 SUPERFAMILY Homeodomain-like 14 78 IPR009057 -
Apr351g0004 833 CDD homeodomain 15 75 IPR001356 GO:0003677
Apr351g0004 833 MobiDBLite consensus disorder prediction 121 148 - -
Apr351g0004 833 Coils Coil 70 111 - -
Apr351g0004 833 PANTHER CLASS III HD-ZIP PROTEIN CNA1 1 833 - -
Apr351g0004 833 CDD START_ArGLABRA2_like 150 365 - -
Apr351g0004 833 Gene3D - 6 81 - -
Apr351g0004 833 SUPERFAMILY Bet v1-like 155 365 - -
Apr351g0004 833 Pfam MEKHLA domain 690 832 IPR013978 -
Apr351g0004 833 ProSiteProfiles START domain profile. 146 374 IPR002913 GO:0008289
Apr351g0004 833 Pfam START domain 156 364 IPR002913 GO:0008289
Apr351g0004 833 SMART HOX_1 12 78 IPR001356 GO:0003677
Apr351g0004 833 ProSiteProfiles 'Homeobox' domain profile. 10 74 IPR001356 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0004 1 785 Homeobox Transcription Factor Family AT1G52150 85.570 0.0 1402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Apr351g0004 START 3.6e-53 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0004 K09338 - gmx:100800165 1610.89