Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0001 ATGCCGGTGCTGCGTAGCGGAGTGCGCAGGGGCCGGGCAGCAGCGAAGCAGCAGCAGCAGCAAGAGCAGAGTCCGGTGGAGGGGGAAGCGATTGCAACGAGAACAAGGAGGCGGCGTGCGGCGGCGGCGGCGGCGGCAGTGCCGAGGAATAACAAGCAGCAGCAGGCAGCTGCGGTGGTAAATGAGAACGTAGTTGTTTTGGCGGCGAAGGAAGAAGAGAATCGGGGATTGGAGGAAGGTGTTGGTGGCGGTGGAGCGGAGAAGGAAGAGGTAGGGGAGAAAGAGATGGATGAGTATGACAGTGGTGGTCGCAGCAATGATAAGGCCAATGCCGGTGAAGAAGATGCGAACGCCCCTCAGGTTCCTCAGAAGGTTCAAGTTGGTAATTCCCCCTACTATAAAGTGGAAAGAAAACTCGGCAAGGGTGGATTTGGCCAAGTATATGTTGGACGACGTGTTTCTGGTGGAAATTTGAATGAGAGAACTGGACCGGGAGCTCTAGAGGTTGCATTAAAACTTGAGCACAGAACTAGTAAAGGATGTACCTATGGACCACCCTATGAGTGGCAAGTGTACAACACTCTTGGTGGCAGTCATGGTGTGCCACAAGTACACTACAAGGGTAGGCAAGGTGACTATTATGTGATGGTTATGGATATGCTGGGACCTAGCCTGTGGGATGTTTGGAATAATAATTCTCATACCATGTCCACTGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCTATATTGGAGAAGATGCACTCTCGAGGGTATGTGCATGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGTCCTCCTGGGACACCTGACGAGAAAAAATTGTTCCTTGTAGATCTTGGATTAGCTACTAAATGGAGGGATAGTACAACAGGCTTGCATGTAGAATATGACCAAAGGCCAGATGTTTTCAGGGGCACAGTCCGCTATGCTAGTGTGCATGCACATTTGGGAAGAACGGGAAGCAGGAGGGATGACTTGGAATCTCTTGCATATACACTGATTTTTCTTCTCCGAGGTCGTCTTCCTTGGCAAGGGTACCAGGGAGAAAACAAAGGATTTCTGGTTTGCAAGAAGAAAATGGGAACATCTCCAGAGAACCTATGTTGCTTTTGTCCCCAACCTTTTAAACAGTTTGTTGAACATGTTGTGAACTTGAAGTTTGATGAAGAGCCTAACTATGCAAAATATATTTCTTTGTTTGATGGGATTGTGGGTCCAAATCCAGATATTAGACCAATTAATACAGAAGGAGCACAAAAGCTCATCGGTCATAAGAGAGGCCGGTTGGCGATGGAAGAAGAGGATGACGAACAACCCAAAAAGAAGATTCGTATTGGTTTGCCAGCAACCCAGTGGATTAGTGTTTACAATGCTCGCAGACCAATGAAACAAAGGTAA 1425 0.4786 MPVLRSGVRRGRAAAKQQQQQEQSPVEGEAIATRTRRRRAAAAAAAVPRNNKQQQAAAVVNENVVVLAAKEEENRGLEEGVGGGGAEKEEVGEKEMDEYDSGGRSNDKANAGEEDANAPQVPQKVQVGNSPYYKVERKLGKGGFGQVYVGRRVSGGNLNERTGPGALEVALKLEHRTSKGCTYGPPYEWQVYNTLGGSHGVPQVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMGTSPENLCCFCPQPFKQFVEHVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDEQPKKKIRIGLPATQWISVYNARRPMKQR* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0001 474 SUPERFAMILY Protein kinase-like (PK-like) 133 413 IPR011009 -
Apr351g0001 474 MobiDBLite consensus disorder prediction 1 57 - -
Apr351g0001 474 ProSitePatterns Protein kinases ATP-binding region signature. 139 172 IPR017441 GO:0005524
Apr351g0001 474 Pfam Protein kinase domain 133 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0001 474 MobiDBLite consensus disorder prediction 13 28 - -
Apr351g0001 474 PANTHER CASEIN KINASE 1-LIKE PROTEIN HD16 ISOFORM X1 95 470 - -
Apr351g0001 474 CDD STKc_CK1 133 409 - -
Apr351g0001 474 PANTHER CASEIN KINASE-RELATED 95 470 - -
Apr351g0001 474 MobiDBLite consensus disorder prediction 74 111 - -
Apr351g0001 474 SMART serkin_6 133 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0001 474 MobiDBLite consensus disorder prediction 74 126 - -
Apr351g0001 474 ProSiteProfiles Protein kinase domain profile. 133 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0001 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Apr351g0001 474 Gene3D Transferase(Phosphotransferase) domain 1 98 453 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0001 94 358 AGC Kinase Gene Family AT3G08730 23.970 1.41e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Apr351g0001 Pkinase 3.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0001 - - gmx:100799630 766.148