Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2680 ATGGTAATTTATGGCCCAAGTTCATCGCTGTACTGTGGATGGTGGAGGCCTTTCCTTCAGGTTGAGGCAGAGGGCAATTGGCACAGTAATAATAGGTGCAGCAGCAATTGTTCCAACAAGAACAATATGCGTAGTAGGAAAAGAAGCATCGCTTGCAAATTGGACCTCAGTAGAGCATGCCGCAGCTACAGTCTGGCTCTAGCACTTACTACCTTTCTCTCAGTTACTGCGGTAATAGCTTCTGTGGCAACAGCAGATGCAACTCCTGAACCGGAGACTCTATCTAACATACCCCAAACATTGTCCGGTGAGTGCCCGTTGCCCAAAGACTGCAAGAAACCTAAAATACAGAAACCCAAGTCAAGGAAAGCCGAAACCTGCACAATCAAGTGTGTCACTACTTGCATCCGAGGCGGTCAAGGCTCTCCTGGCGAAGGCCCCCTTAATGTCATAAGACCTCTCGTTGTTTTCAAGCAAGGGTTCCGTACTCGTCAATACTGCAGTTGGGATCCATCCATAAACCCAAAACCGCCTTGTTATGGTGACATTCCCAATTGGGTGGGCTTGGTTTGTAAGAATGATAGGGTTTGGGGCTTGCGTCTCGAGAGAATGGGACTAGGCGGCATCCTCAACATGGAATTTCTCAGTTCAATGCCGGCTCTGCGGACGCTTAGCCTGATGAACAATACCTTTGTGGGTCCCTTGCCCAACGTCAAGATGTTGACAAATTTGAGGTCCCTTTACTTGTCCTATAATCATTTCTCAGGACAAATACCTGACAATGTTTTTGCGGGTTTGCATAAACTGAGGAAAGTGTATTTGGCCAATAACGAGTTCACAGGTAAAATTCCTTCCTCCCTTGCTACTTTGCCTAGTCTCCTCATCCTCAGGCTCGACTCAAACAAGTTTGAAGGCCAAATCCCCCAGTTTCAACACAATAATTTGACGATTATTAACCTCTCCAACAATGACTTGGAGGGTCCCATCCCGATCAATCTACGCAACTTTGACGCCGCCTCCTTTAGTGGCAACCAGGGTCTTTGTGGGCCACCTCTGACGAATAAGTGCCAAGAGGCAAGCGCGGAGACTACTGGGAAAATGCGCGTTCTGAAAATATTACTTGCTGTGATCGTGATAGCATTGATAGTAGCCATCCTGATTGCAGCGTTAGTGATATGTCGCTTGAGGTCACAGTCACATAAGCACCCTGCAACTGATGAGGCCTCAATGTTCCAGGGGCAGGCCTCCAACAAATACGTTCCTCCCGTTTATGTAAAAACCAAAAGCCTAGCGGATCACTATGATGCTAGTCCTAAGAAGGTGTCGGGTAACATACATGGACATGGACATGGACATTCTAAGAGGGGGGAACAAGGCAGCAAACTGACATTCCTCCGGCATGACGGACTTAAGTTTGATTTGCAAGATTTGCTGAAGGCCTCCGCAGAAATTTTAGGCAGTGCCTCATTTGGGTCTTCCTACAAGGCTGTGGTTTTGGATGGTCAAGCCGTGGTTGTCAAGAGGTACAAGCAAATGAACAACGTGCCAAGAGAGGAGTTCCATGAGCATATGAGAAGACTAGGCAACCTCAACCATCCCAATCTTCTCCCTCTCCTCGCCTATTATTATAGAAAAGAAGAGAAGCTCTTACTTTCAGCCTTTGTTCATAATGGTTGCTTAGCCAGCCATCTTCACGGTAACCATAACTATCAAAAGCCAGGGCTTGATTGGCCAACTCGCTTGAAAATTGTCAAAGGTGTAGCCAAGGGTTTGGCTTACCTATACAACGCACTCCCAAGTTTGACTGTGCCTCATGGTCATCTCAAATCTTCCAATGTGCTTTTGGATGAATCTTTTGAGCCCCTACTCACTGATTATGCCCTCAGTCCTGTGATCAACCTTGACCATGCCCAACAAATCATCATGCCTTACAAATCTCCGGAGTATGCTCAACTTGGCCGCATTACAAAGAAGACTGATGTGTGGAGTTTCGGGATTCTTATATTGGAGATCTTGACTGGAAAATTCCCCGAGAACTATCTTACACACAGGCATAATAGTGATTCTGACATAGCCAATTGGGTAAATACCATGATTACTGAGAAGCGCACTAGTGATGTGTTTGATATAGAGATGGGAGGAATTGGAAATAGTAAAGCTGAATTGCTCAAACTCCTAAAGATTGGCTTGAGTTGTTGTGAGGAGAATGTGGAAAGAAGGTTGGATATCAAGGAAGCTCTTGAGCAGATTGAAGACTTGAAGGAGGGTGAAAATGATCATGGAGAATACTCTTCCACCCTCATCACCACCGAAAGGGATGCTTACAGAGCTGTATGA 2337 0.4604 MVIYGPSSSLYCGWWRPFLQVEAEGNWHSNNRCSSNCSNKNNMRSRKRSIACKLDLSRACRSYSLALALTTFLSVTAVIASVATADATPEPETLSNIPQTLSGECPLPKDCKKPKIQKPKSRKAETCTIKCVTTCIRGGQGSPGEGPLNVIRPLVVFKQGFRTRQYCSWDPSINPKPPCYGDIPNWVGLVCKNDRVWGLRLERMGLGGILNMEFLSSMPALRTLSLMNNTFVGPLPNVKMLTNLRSLYLSYNHFSGQIPDNVFAGLHKLRKVYLANNEFTGKIPSSLATLPSLLILRLDSNKFEGQIPQFQHNNLTIINLSNNDLEGPIPINLRNFDAASFSGNQGLCGPPLTNKCQEASAETTGKMRVLKILLAVIVIALIVAILIAALVICRLRSQSHKHPATDEASMFQGQASNKYVPPVYVKTKSLADHYDASPKKVSGNIHGHGHGHSKRGEQGSKLTFLRHDGLKFDLQDLLKASAEILGSASFGSSYKAVVLDGQAVVVKRYKQMNNVPREEFHEHMRRLGNLNHPNLLPLLAYYYRKEEKLLLSAFVHNGCLASHLHGNHNYQKPGLDWPTRLKIVKGVAKGLAYLYNALPSLTVPHGHLKSSNVLLDESFEPLLTDYALSPVINLDHAQQIIMPYKSPEYAQLGRITKKTDVWSFGILILEILTGKFPENYLTHRHNSDSDIANWVNTMITEKRTSDVFDIEMGGIGNSKAELLKLLKIGLSCCEENVERRLDIKEALEQIEDLKEGENDHGEYSSTLITTERDAYRAV* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2680 778 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 153 762 - -
Apr2g2680 778 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 153 762 - -
Apr2g2680 778 SUPERFAMILY Protein kinase-like (PK-like) 483 752 IPR011009 -
Apr2g2680 778 ProSiteProfiles Protein kinase domain profile. 479 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2680 778 Pfam Leucine rich repeat 242 303 IPR001611 GO:0005515
Apr2g2680 778 SUPERFAMILY L domain-like 176 335 - -
Apr2g2680 778 Gene3D Phosphorylase Kinase; domain 1 446 554 - -
Apr2g2680 778 Gene3D Transferase(Phosphotransferase) domain 1 555 773 - -
Apr2g2680 778 Gene3D Ribonuclease Inhibitor 152 312 IPR032675 -
Apr2g2680 778 Gene3D Ribonuclease Inhibitor 313 358 IPR032675 -
Apr2g2680 778 Pfam Protein tyrosine and serine/threonine kinase 483 695 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2680 Apr-Chr2 30472936 30480129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2680 154 769 Receptor kinase-like Gene Family AT5G35390 49.120 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr2g2680 PK_Tyr_Ser-Thr 3.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2680 - - aprc:113854862 1483.39