Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2678 ATGTTGGTTCAAATTCACAGAAATTGGTTTCTTCCAGTCCCAGTTGCGTTTGCACACAAGATGGAGGTGAATAAATGCGTGATATGGAAGCATCCTCCAATTGAAGATGGAAGAAGAAGAAGAAAAAGACGACGACGAAATTGGCGTTGTGGTTCGGGGGAGGCAATCTCGGAATGGGAAGTGGAGGAGGCTGGTAAGGCAGTTTCAAGTTATCTAGAAGAATTGGGGGTGTCGGAGGAGAATTCAGTGTGGATCGCGTCAAAGTCACGCGCATATGTGAAGATGTTGGTGGAAGGGGTGAGGGATTTGGAGCAGTGGGATGAGCAAATTGCAGGGTTGAGCTTCAAGGAGAAGATTATTAATATTGCGACTAAAAAAGGAGAGAAAGGGAAAGTAGCGTACCTAGAGACTTTGGGCTTGAGTCTTTCTTCGTCTATGAATGTGGCCAGGTATCTTTCTGCTGACACCCTCCCGTCTCTGATAAACAAGGTTACGCGTATGAAGCAACTCTTATTTTCTGCCGATCTTGATGATTGTGATTACTTTCGCTTATTCATTAAAAATACTCGCCTCATGATGCGCCACTTATCTATTTCCATTGACGAAGATCTGCAACACACTTTGTCCTTTTTGGAAAAGGTTGAAGCGAGACGTGGTGGTCTAAATATTTTGGCTTCCAGAGATTCCGCTTTCCATTACTTGATCGAATCATTTCCTCGTCTTCTTCAGTTATCAGTAAACGATCACTTCGCTCGTTTACTGGATTTTCTTCACAACATTGGAATCCCTGTTTTTCGCATCCCATACATAATACTGGCTTTTCCTCCTCTTCTGTTCTGGAATCCGCACCTCCTTAAAACTAGAATCCTCTCCTTGAACCAGATTGATATCGTGGATGAAGATTATGCTAAGTTGTTGCTAAAATATCCTTGGATTCTATCTACGAGCATTCAAAGGAATTACACGGAGGTCCTTGCCTTTTTATACTCTTTGAAGGTTCCAACGACTTGGATAGACCGTGCAATTGAAAGCCAGCCTCATCTATTGGGTTGTTCAACTAGCAAGCTGAAGTTGATGGTGGATCAGTTTGCAGAACTAGGAGTTCAAGGCAAAAAGTTGAATCGGGTTATTGCTAAAAGTCCTCAACTACTATTGCGGAAGCCTGAAGACTTTCTACAGATTGTTCTGTTCTTTGAAAATATGGATTTTGATAAAGAAACTGTTGGGAGAATACTTGCCCGCTGCCCTGAAATTTTTGCTGCCAGCATCAATAATACACTACAGAGGAAGATTGAATTCCTTGGTGGGGTTGGTGTTTCTAAAACTTTCCTTTGTGGGGTTATCAGAAAGTATCCAGAATTACTTGTTTCTGACACTGACACAACTTTACTGCAAAGGGTACTGTACTTGATGAAATTAGGGCTTTCAGAGAAAGATATTGCATTTATGGTACGCACATTTTCTCCTCTCCTTGGGTACAGTATAGATGGGGTTCTGAAGCCAAAAATAGAATTCTTGGTGAATTCAATGGAGAGGCCAGTAAGAGATGTGGTGGGCTACCCTAGGTATTTTAGCTATTCACTAGCAAAGAAGATAAAGCCCAGATATTGGGTGTTGAAAGGAAGGAATATCAAATGTAGTTTAAAGGATATGCTGGGAAAAAATGATGAAGAATTTGCTGCTGAATTTATGGATGTCGGAAGGATGCTCGTTTATCCTCCTGTGCCTTCTTCTAATGATAGCCTGTAA 1749 0.4162 MLVQIHRNWFLPVPVAFAHKMEVNKCVIWKHPPIEDGRRRRKRRRRNWRCGSGEAISEWEVEEAGKAVSSYLEELGVSEENSVWIASKSRAYVKMLVEGVRDLEQWDEQIAGLSFKEKIINIATKKGEKGKVAYLETLGLSLSSSMNVARYLSADTLPSLINKVTRMKQLLFSADLDDCDYFRLFIKNTRLMMRHLSISIDEDLQHTLSFLEKVEARRGGLNILASRDSAFHYLIESFPRLLQLSVNDHFARLLDFLHNIGIPVFRIPYIILAFPPLLFWNPHLLKTRILSLNQIDIVDEDYAKLLLKYPWILSTSIQRNYTEVLAFLYSLKVPTTWIDRAIESQPHLLGCSTSKLKLMVDQFAELGVQGKKLNRVIAKSPQLLLRKPEDFLQIVLFFENMDFDKETVGRILARCPEIFAASINNTLQRKIEFLGGVGVSKTFLCGVIRKYPELLVSDTDTTLLQRVLYLMKLGLSEKDIAFMVRTFSPLLGYSIDGVLKPKIEFLVNSMERPVRDVVGYPRYFSYSLAKKIKPRYWVLKGRNIKCSLKDMLGKNDEEFAAEFMDVGRMLVYPPVPSSNDSL* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2678 582 PANTHER TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIAL 106 573 - -
Apr2g2678 582 PANTHER CGI-12 PROTEIN-RELATED 106 573 IPR003690 GO:0003690|GO:0006355
Apr2g2678 582 SMART mt_12 514 545 IPR003690 GO:0003690|GO:0006355
Apr2g2678 582 SMART mt_12 232 263 IPR003690 GO:0003690|GO:0006355
Apr2g2678 582 SMART mt_12 374 404 IPR003690 GO:0003690|GO:0006355
Apr2g2678 582 SMART mt_12 481 513 IPR003690 GO:0003690|GO:0006355
Apr2g2678 582 SMART mt_12 303 334 IPR003690 GO:0003690|GO:0006355
Apr2g2678 582 SMART mt_12 445 476 IPR003690 GO:0003690|GO:0006355
Apr2g2678 582 SMART mt_12 409 440 IPR003690 GO:0003690|GO:0006355
Apr2g2678 582 SMART mt_12 339 369 IPR003690 GO:0003690|GO:0006355
Apr2g2678 582 Pfam mTERF 254 560 IPR003690 GO:0003690|GO:0006355
Apr2g2678 582 Gene3D Transcription termination factor 3, mitochondrial 355 568 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr2g2678 mTERF 5.6e-90 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2678 K15032 - gmx:100802127 838.95