Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2673 ATGCCAGCGGTTTACGGAGCTCGCTTGACCACCTTCGAAGACTCCGAGAAGGAGAGTGAATACGGTTACGTTCGTAAGGTTTCGGGACCAGTTGTGGTTGCTGATGGCATGGCTGGGGCTGCCATGTATGAACTAGTACGTGTTGGTCGTGATAATCTCATTGGTGAAATTATTCGTTTGGAAGGGGATTCAGCTACTATCCAAGTTTATGAGGAAACGGCTGGTTTAATGGTTAATGACCCTGTCTTACGTACACACAAGCCTTTGTCTGTGGAGTTGGGGCCTGGAATACTGGGGAATATTTTTGATGGCATTCAGAGGCCATTGAAAACTATTGCTAAAAGATCTGGTGATGTCTATATACCTCGTGGTGTATCTGTTCCAGCACTTGACAAAGATACACTATGGGAGTTTCAGCCTAAAAAAATTGGCGAAGGAGACCTATTGACTGGTGGAGATCTATATGCTACTGTTTTTGAGAACAGTCTAATGCAACACCATATTGCCCTTCCTCCTGATGCCATGGGAAAAATTACTTACATTGCGCCACCTGGTCAATATTCCTTGAAGGATACTGTGTTGGAGCTTGAGTTTCAAGGTGTCAAAAAGAAATTCACTATGCTTCAGACTTGGCCAGTACGTACGCCAAGGCCTGTTGCATCAAAACTAGCTGCTGATACTCCTCTTCTTACTGGTCAGCGTGTGCTTGATGCTCTTTTCCCCTCAGTTCTTGGTGGAACTTGTGCCATACCTGGAGCTTTTGGTTGTGGTAAAACTGTCATTAGTCAGGCCCTTTCTAAGTATTCAAACTCTGATGCTGTTGTTTATGTTGGCTGCGGGGAACGTGGAAATGAAATGGCAGAGGTCCTTATGGACTTTCCACAACTTACAATGACATTGCCTGATGGTCGTGAAGAATCTGTTATGAAGCGCACAACACTGGTGGCCAACACTTCAAATATGCCAGTGGCTGCTCGTGAAGCTTCAATTTATACTGGAATCACTTTAGCTGAGTATTTTAGAGACATGGGTTACAATGTCAGCATGATGGCAGATTCAACATCTAGATGGGCAGAAGCTTTGCGTGAAATCTCAGGACGGCTGGCAGAAATGCCTGCAGATAGCGGATATCCTGCATATCTTGCTGCACGTTTAGCCTCTTTCTATGAACGTGCGGGCAAAGTAAAATGTCTTGGAGGTCCTGAACGTACTGGTAGTGTCACAATTGTTGGTGCTGTTTCTCCACCCGGAGGAGATTTTTCAGATCCTGTTACTTCTGCAACCCTCAGCATAGTTCAGGTTTTCTGGGGTTTGGACAAAAAACTTGCTCAGAGGAAGCATTTTCCTTCTGTGAACTGGCTTATTTCTTATTCAAAGTACTCATCGGCACTGGAATCCTTTTATGAGCAATTTGATCCAGATTTTATAAACATTAGGACAAAGGCTCGTGAAGTGCTGCAAAGAGAAGATGACTTGAATGAAATTGTCCAGGATGCCTTAGCTGAAGCAGACAAGATCACCTTAGAAACTGCAAAGCTATTAAGAGAGGATTATCTTGCACAAAATGCTTTTACACCATATGATAAATTTTGTCCCTTCTACAAGTCTGTTTGGATGATGCGCAACATTATCCACTTTTACAATTTAGCAAATCAGGCAGTAGAGAGGGGCGCTGGTTCAGATGGTCAGAAAATAACTTACAGCCTCATCAAGCATCGTCTGGGAGATCTGTTCTATCGTTTAGTGTCTCAGAAATTTGAGGATCCAGCAGAAGGTGAAGCTGCTTTGGTTACCAAATTTAAGAAGTTACATGAGGACCTGACTAATGGTTTCCGCAACCTGGAGGATGAAGCCCGATGA 1860 0.4382 MPAVYGARLTTFEDSEKESEYGYVRKVSGPVVVADGMAGAAMYELVRVGRDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPALDKDTLWEFQPKKIGEGDLLTGGDLYATVFENSLMQHHIALPPDAMGKITYIAPPGQYSLKDTVLELEFQGVKKKFTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDAVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSSALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQDALAEADKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGSDGQKITYSLIKHRLGDLFYRLVSQKFEDPAEGEAALVTKFKKLHEDLTNGFRNLEDEAR* 620
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2673 619 Gene3D - 91 457 IPR027417 -
Apr2g2673 619 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 471 549 - -
Apr2g2673 619 Gene3D - 134 205 - -
Apr2g2673 619 TIGRFAM V-ATPase_V1_A: V-type ATPase, A subunit 20 607 IPR005725 GO:0033180|GO:0046961|GO:1902600
Apr2g2673 619 Gene3D - 459 607 IPR024034 -
Apr2g2673 619 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 17 89 IPR036121 GO:0046034|GO:1902600
Apr2g2673 619 Pfam ATP synthase alpha/beta family, beta-barrel domain 25 85 IPR004100 GO:0046034|GO:1902600
Apr2g2673 619 Gene3D - 20 89 IPR023366 -
Apr2g2673 619 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 232 458 IPR000194 GO:0005524
Apr2g2673 619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 463 IPR027417 -
Apr2g2673 619 Hamap V-type ATP synthase alpha chain [atpA]. 19 618 IPR022878 GO:0046034|GO:0046961
Apr2g2673 619 CDD ATP-synt_V_A-type_alpha_N 21 87 - -
Apr2g2673 619 CDD ATP-synt_V_A-type_alpha_C 475 577 - -
Apr2g2673 619 ProSitePatterns ATP synthase alpha and beta subunits signature. 449 458 IPR020003 GO:0005524
Apr2g2673 619 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 3 618 - -
Apr2g2673 619 CDD V_A-ATPase_A 88 460 - -
Apr2g2673 619 Pfam ATPsynthase alpha/beta subunit N-term extension 102 223 IPR031686 -
Apr2g2673 619 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 3 618 IPR022878 GO:0046034|GO:0046961
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2673 1 619 Primary Pumps ATPases(2) AT1G78900 92.777 0.0 1194
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2673 K02145 - gmx:100775727 1207.2
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2673 2 30418753 30424842 Apr2g2673 2 30418753 30424842 ECH