Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2667 ATGACCTCCACCGCGCGTGGCTCCACCTCCTCCTCCAATGGCCTTCTCACCGTCACCATTGCAAGCAGCCACCCTGACGATCCCACTTCCATCAACCACGACGATGTCGTCGTCGACGACGACGACTTGCTCGCTGATCCCGACGATCCCTTCGATATCACCCACACTAAAAATGCACCCCCCGAGGCCCTCAGGCGTTGGAGAGAAGCGGCTTTTGTGCTCAATGCCTCCAGGCGTTTTAGATACACTCTTGACTTGAAAAAGGAAGAGGAGACAGAGCACAAGAAAAACATGATTAGAGCCCACGCACAAGTCATAAGAGCAGCATTGCTTTTCAGATTGGCTGGTGAACGTGAACTAGTGACAAGTACAACAGTGGCATCCCCAACTCCAGTAGGTGAGTATGCAGTTGGGCTTGAACAACTTGTTTCAATGAGTAAGGAACAGAGTATTTCTGCTCTACAACAACATGGAGGGGTTAAAGGCCTATCGGATTTACTAAAATCAAATCCGGATAAAGGGATTAGTGGAGATGATGTTGACCTATTAAAGAGAAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAGGGGAAAAGTTTCTGGAGGTTTCTATGGGAATCTTGGCAAGATCTCACCCTTATAATATTGATTATAGCAGCTGTGGTATCATTGGTACTCGGAATAAAAACAGAGGGTTTGGAAGAAGGATGGTATGACGGGGGAAGCATTGCTTTCGCTGTTTTTCTTGTCATTGTAGTTACAGCTGTCAGTGATTATCGGCAATCTCTGCAGTTTCAGAACTTGAATGCCGAAAAACAAAACATAAAATTGGAGGTCTTTAGAGGTGGCAGAACAATAACAATATCGATATTTGACATTGTTGTTGGTGATGTAGTGCCCCTTAAAATAGGAGATCAAGTCCCTGCCGATGGCGTTTTAATCACTGGCCACTCACTTGCCATTGATGAATCCAGTATGACTGGTGAAAGCAAAATTATTCACAAGGATCAAAAAGCACCTTTTTTGATGTCTGGTTGCAAAGTAGCAGATGGAGTTGGTACTATGCTGGTAACCGGTGTTGGTATAAATACTGAGTGGGGACTGTTGATGGCAAGTATCTCAGAGGATACGGGAGAAGAGACCCCATTACAGGTACGATTGAATGGAGTAGCAACTTTCATTGGCATAGTTGGGCTTACTGTAGCTGTTTGTGTCCTTGTAGTCCTCTTGGGAAGATACTTTTCTGGCCATACGAAAGATCTAGATGGAAAAGTACAATTTGTTGCTGGAGAGACTACTATCAGCGAAGCAGTAGATGGGGTCATCAAAATTTTTACCATTGCAGTAACAATAGTGGTTGTTGCAGTGCCCGAAGGTCTACCTTTAGCAGTTACTTTAACCTTGGCATACTCAATGCGGAAAATGATGGCAGACAAAGCCTTGGTGCGAAGGCTGTCAGCATGTGAAACTATGGGATCTGCTACAACCATTTGCAGTGATAAGACTGGAACTTTGACCTTAAATCAGATGACTGTTGTTGAGGCATATGTTGGGGGGAAGAAACTAAATCCACCGGATGACTTGAGAAAGATGCATCCGGAAGTTGTATCTTTGATAAATGAGGGCATTGCACAAAATACAACCGGCAATGTTTTCGTACCTAAGGATGGCGGAGAGACAGAGGTGTCAGGATCTCCTACAGAGAAAGCAGTTCTTTCTTGGGCTCTGAAGTTGGGAATGAATTTTGATCTTATTAGATCAAATTCATCAATTCTCCATGTCTTCCCCTTCAATTCTGAGAAAAAGCGCGGTGGTGTTGCTGTAAAACTGGTTGACTCTGCAGTACATATACATTGGAAAGGAGCTGCAGAGATAGTTCTGGGAACATGTACTCAATATCTTGATGCAGATGGACACTTGAAATCCATTGAAGAAGAGAAGGGATTCTTCAAGAAAGCTATTGAAGACATGGCTGCCCAGAGCTTGCGTTGTGTTGCCATTGCATACAGATCATATAATTTAGACCAAATTCCATCTAATGAGGAGGATTTAGACAAATGGTCCCTGCCAGAACATGAACTTGTCTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGTCCTGGAGTCAAAGATGCTGTGGAAGTATGCATTGAAGCTGGCGTTAAGGTGCGCATGGTTACGGGCGACAATCTTCAAACAGCAAAAGCAATAGCTTTGGAGTGTGGAATACTGATGTCAAATGAAGATGCTGTTGAGCCAAATATAATTGAAGGAAAGACATTCCGTGAACTATCTGAAAAAGACAGGGAGCAAGTTGCAAAAAGAATAACGGTGATGGGGAGGTCTTCTCCTAATGACAAGCTGTTGCTCGTGCAAGCACTACGTAAAATTGGTGAAGTAGTTGCTGTCACAGGAGATGGCACCAATGACGCTCCTGCGCTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACAGAAGTTGCAAAAGAAAGTTCAGACATTATAATCCTGGATGATAACTTCGCATCAGTTGTAAAGGTTGTTCGCTGGGGCCGTTCTGTATATGCAAATATTCAGAAATTTATTCAGTTCCAGCTTACTGTTAATGTTGCTGCTCTTGTAATAAATGTTGTGGCAGCAGTATCTTCTGGTGACGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGGGCTCTTGCACTGGCTACAGAACCACCAACAGACAGTCTGATGCACAGATCACCGGTTGGCCGAAGGGAACCTCTTATAACAAATGTCATGTGGAGGAACTTGGTCGTCCAGGCACTCTATCAAGTCGCTGTTCTTCTTATCCTTAACTTCTGTGGTGAAAGTATTCTACGTAACCATCAAGATTCCAGAGCCCATACCATACAAGTGAAGAATACTTTAATTTTCAATACATTCGTCTTCTGCCAAATATTTAACGAGTTCAATGCTCGAAAACCAGATGAGATGAATGTCTTCCGGGGGGTAACTAAAAACCGTCTCTTCATGGGAATTGTTGGAATGACCTTTGTGCTTCAGATAATCATCATCGAATTCCTTGGAAAATTCACGACGACGGTGAGGCTTGATTGGAAGCTCTGGCTTGCTTCTCTTTCTATTGGGTTTTTCAGCTGGCCTCTGGCGATAGTCGGAAAATTCATTCCAGTTCCCAAAACACCATTGTCCCGATACTTCAGGAGATTCAGGAAGTCTCGTGCAGCACAATAG 3273 0.4357 MTSTARGSTSSSNGLLTVTIASSHPDDPTSINHDDVVVDDDDLLADPDDPFDITHTKNAPPEALRRWREAAFVLNASRRFRYTLDLKKEEETEHKKNMIRAHAQVIRAALLFRLAGERELVTSTTVASPTPVGEYAVGLEQLVSMSKEQSISALQQHGGVKGLSDLLKSNPDKGISGDDVDLLKRKNAFGTNTYPRKKGKSFWRFLWESWQDLTLIILIIAAVVSLVLGIKTEGLEEGWYDGGSIAFAVFLVIVVTAVSDYRQSLQFQNLNAEKQNIKLEVFRGGRTITISIFDIVVGDVVPLKIGDQVPADGVLITGHSLAIDESSMTGESKIIHKDQKAPFLMSGCKVADGVGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAVCVLVVLLGRYFSGHTKDLDGKVQFVAGETTISEAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGKKLNPPDDLRKMHPEVVSLINEGIAQNTTGNVFVPKDGGETEVSGSPTEKAVLSWALKLGMNFDLIRSNSSILHVFPFNSEKKRGGVAVKLVDSAVHIHWKGAAEIVLGTCTQYLDADGHLKSIEEEKGFFKKAIEDMAAQSLRCVAIAYRSYNLDQIPSNEEDLDKWSLPEHELVLLAIVGIKDPCRPGVKDAVEVCIEAGVKVRMVTGDNLQTAKAIALECGILMSNEDAVEPNIIEGKTFRELSEKDREQVAKRITVMGRSSPNDKLLLVQALRKIGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDSLMHRSPVGRREPLITNVMWRNLVVQALYQVAVLLILNFCGESILRNHQDSRAHTIQVKNTLIFNTFVFCQIFNEFNARKPDEMNVFRGVTKNRLFMGIVGMTFVLQIIIIEFLGKFTTTVRLDWKLWLASLSIGFFSWPLAIVGKFIPVPKTPLSRYFRRFRKSRAAQ* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2667 1090 SFLD p-type atpase 482 859 IPR044492 -
Apr2g2667 1090 SUPERFAMILY Calcium ATPase, transduction domain A 277 373 IPR008250 -
Apr2g2667 1090 SMART Cation_ATPase_N_a_2 156 230 IPR004014 -
Apr2g2667 1090 Gene3D - 208 1059 - -
Apr2g2667 1090 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 145 1071 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Apr2g2667 1090 Gene3D - 183 376 - -
Apr2g2667 1090 PRINTS P-type cation-transporting ATPase superfamily signature 324 338 - -
Apr2g2667 1090 PRINTS P-type cation-transporting ATPase superfamily signature 500 514 - -
Apr2g2667 1090 PRINTS P-type cation-transporting ATPase superfamily signature 700 711 - -
Apr2g2667 1090 PRINTS P-type cation-transporting ATPase superfamily signature 722 732 - -
Apr2g2667 1090 PRINTS P-type cation-transporting ATPase superfamily signature 807 826 - -
Apr2g2667 1090 PRINTS P-type cation-transporting ATPase superfamily signature 831 843 - -
Apr2g2667 1090 SUPERFAMILY Calcium ATPase, transmembrane domain M 158 1071 IPR023298 -
Apr2g2667 1090 Pfam Cation transporting ATPase, C-terminus 892 1068 IPR006068 -
Apr2g2667 1090 Gene3D - 61 113 - -
Apr2g2667 1090 Pfam E1-E2 ATPase 277 478 - -
Apr2g2667 1090 PRINTS Sodium/potassium-transporting ATPase signature 243 263 - -
Apr2g2667 1090 PRINTS Sodium/potassium-transporting ATPase signature 493 514 - -
Apr2g2667 1090 PRINTS Sodium/potassium-transporting ATPase signature 619 637 - -
Apr2g2667 1090 PANTHER CATION TRANSPORTING ATPASE 48 1084 - -
Apr2g2667 1090 ProSitePatterns E1-E2 ATPases phosphorylation site. 502 508 IPR018303 -
Apr2g2667 1090 Pfam Ca2+-ATPase N terminal autoinhibitory domain 48 91 IPR024750 GO:0005516
Apr2g2667 1090 SUPERFAMILY HAD-like 498 912 IPR036412 -
Apr2g2667 1090 SFLD C1.7: P-type atpase like 482 859 - -
Apr2g2667 1090 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 774 887 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g2667 1090 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 438 524 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g2667 1090 Gene3D - 497 852 IPR023214 -
Apr2g2667 1090 Pfam haloacid dehalogenase-like hydrolase 497 821 - -
Apr2g2667 1090 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 507 704 IPR023299 GO:0000166
Apr2g2667 1090 PANTHER CALCIUM-TRANSPORTING ATPASE 48 1084 - -
Apr2g2667 1090 Gene3D - 510 707 IPR023299 GO:0000166
Apr2g2667 1090 Pfam Cation transporter/ATPase, N-terminus 157 225 IPR004014 -
Apr2g2667 1090 CDD P-type_ATPase_Ca_PMCA-like 182 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2667 Apr-Chr2 30362110 30376814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2667 8 1090 Primary Pumps ATPases AT3G21180 76.221 0.0 1670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2667 K01537 - gmx:100802659 1890.16