Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr2g2664 | ATGATGAGGTTCATTCTTTTCTTCTCTTCCTTCTTGTTTGTTGTTTCTGCACTAAACTCCGATGGGGTGGCTCTCTTGTCACTCTTGAAGCATTGGACATTGGTGCCTCATTTCGTAAACTCTACCTGGGTTCCCTCTCATTCCGCTCCATGCTCATGGGTAGGAGTTCGATGTGACCATACCCACCGTGTGGTCTCCCTTAACCTCACTGATTCTGGAATTGTTGGTCAATTGGGACCTGAAATTGGAAACTGTAGTCGCCTAGAGTACTTAGACCTTGCCGGTAACAACCTTAGCGGTCAGATACCTCACAGCTTCAAAAACTTGCACAAGCTCAAGATACTAAGCCTTTCCTATAATCTACTCACCGGTGAAATTCCAGATTTCTTGACTCAAATCCCTCAACTATATCTTGTTGATCTGTCTCACAACAGTTTAAGTGGTTCCATTCCCACAAGTATTGGGAACATGAGCCAGCTCTTGATGTTGTATCTTCAGGGTAACCACTTGTCTGGGACAATTCCCTCATCCTTCGGAAACTGCAGTAAGCTACAAGAATTGTTTTTGAATAAAAATGAGTTGCAGGGCGTCCTGCCTCTGAGTCTAAACAATCTCAATGATCTTACTTATTTAGATGTCAGCAGAAATAGTCTTAGAGGTACCATTCCATTGGGTTCTGGGAGTTGTAAAAATTTACAGTTTTTGGATCTCTCATTCAATGTGTTTAGTGGAGGCGTTCCCTCAAGCTTGGGGAACTGTACTAGTTTATCACAATTTGGAGCTGTCCACTGCAACTTAGTTGGGAATATTCCAACCTCCATAGGCCTGCTCACCGAGCTTTCTCTTCTACGCCTTCCTGAGAATCATTTAACTGGAAGAATACCTCCAGAAATTGGTAACTGCAAGTCCTTGGAAGAGTTACATTTGTATTCCAATCGACTTGAGGGAAAGATTCCAAGTGAACTGGGAAAACTAAGTGAACTAAAGGATCTTGAATTGTTTTCCAATCAACTGACCGGTGAGATTCCACTTAGCATCTGGAAGATTAAAGGTCTTCAGTATCTCCTAGTGTATAACAACAGCCTTTCTGGAGAATTGCCTTTGGAGATGACAGAGCTCAAGCATCTGAAGAACATCTCATTGTTTGACAACCACTTCTCTGGAGTCATACCTCAAAGCTTGGGAATTAACAGCAGTTTATTACAGTTGGACTTCACAAATAACAAGTTCAGTGGTAACATTCCACCAAATCTGTGTTTTGGCAAGAAGTTAAGCATCCTGAATATGGGCATCAATCAACTTCAAGGCACCATACCTCCTGATGTTGGAAGCTGTCCAACTCTTAGAAGGTTAATTCTTAAACAAAATAATTTTACTGGACCTCTTCCTAATTTTAAAGGCAATCCGAACCTCGCATATATGGACATCAGCAATAACAAAATCGATGGAGCAATTCCATCAAGCTTGGGAAACTGCAGACATCTCACTGACTTGATCTTGTCCACAAACAATTTTTCAGGGCTTATACCCTCTGAGCTGGGGAACCTTGTGAATCTTAGGACTTTGAATCTTGCTCACAACAACTTAGAAGGTCCTTTGCCCTCTCAACTGTCAAACTGTACCAATATGGACAGGTTTGATGTTGGATTCAATTTCCTAAATGGTTCATTGTCGTCAAGTTTACAGAGTTGGACAGGACTAAGTGCTTTAATTTTAAGTGAGAATCACTTTTGCGGGGGCATCCCAGCGTTCTTGTCGGGATTTAAGAAGCTTTCTGAACTACAACTTGGTGGCAATATGTTTGGAGGAAGAATTCCCGGATCCATTGGAGCATTGCAGAATTTGGACTATGGTTTGAATCTAAGTTCTAATGGGCTGATAGGTGACATCCCTGTGGAGATTGGAAAACTGAAAATGTTGCAAAAACTGGATCTATCTCAGAACAATTTGACAGGAAGCATAGAAGTTCTTGACGAACTCCTTTCATTAGTTGAAGTCAATATTTCATACAATTCCTTTTACGGTCCTGTACCAAAGATGCTAACGAAGTTGCTCAATTCTCCCTTGTCATCATTTTTGGGTAATCCTGGCCTATGTATCAATTGTTCACCGTCAGATGGCTTGGCTTGCACAGAAAGCAGCTACATAAAGCAATGTGAAAATAAATCAACTAAACAGAAAGGCCTCAGTAAAGTTGAAATTGTGATGATAGCGCTTGGGTCCTCAATATTTGTTGTTTTGCTGTTGCTGGCATTAGTTTATATTTTTTCTTTTGGCAGAAAATCTAAGCAGGAAGTCCATATCTCTGCTAAAGAGGGTTCTTCGTCCCTTCTTAACAAAGTCATGGAGGCTACGGAAAACCTAGATGATCGGTATATTATTGGCAGAGGAGCCCATGGAGTTGTTTATAAAGCCCTGATAGGTCCAGACAAAGCTTATGCTGTAAAAAAGCTAGGATTTGCTGCGAGCAAAGGTAAGAACCCGAGCATGGTCAGGGAAATTCAAACCCTTGGGAAGATTAGGCATCGAAATCTGGTCAAATTAGAAGATTTTTGGTTGAGAAAAGATTATGGTCTAATTTTGTACAGCTACATGCCAAATGGAAGCCTTCATGATGTTTTACATGAAAAGACTCCGCAGCCAACTTTAGAGTGGAATGTCCGGTATAGGATAGCTATTGGAATTGCCCATGGATTGGATTATCTCCATTATGACTGTGATCCTCCCATAGTGCACCGAGACATCAAGCCAAAGAATATACTTCTGGATTCTGATATGGAGCCTCACATTGCTGACTTTGGTATTGCCAAACTGTTGGATCAGTCTTCTACTTCATATCCTTCCATTTCTGTGCCTGGTACAGTTGGTTATATTGCACCAGAGAATGCTTATACAACAGCAAATAGCAGGGAGTCTGACGTATACAGTTACGGGGTAGTTTTGCTTGAGCTGATAACGAGAAAGAAAGCAGTAGATCCCTCATTCATGGAGGGTACTGATATAGTGAGTTGGGTTTGGTCTGTGTGGAGGGAAACGGGAGAAATTAATCAAATTGCTGATTCAAGCCTTGCAGAGGAATTTCTAGATTCCCATATAATGGAAAAAGTTACTAAAGTGCTTATGGTGGCTTTGAGATGCACTGAGAAGGATTCACACAAGAGACCCACAATGAGAGATGTTACCAACCAATTATCAGATGCTAATCCGCGGACAACAAGTACAAAGGGCTAG | 3231 | 0.4135 | MMRFILFFSSFLFVVSALNSDGVALLSLLKHWTLVPHFVNSTWVPSHSAPCSWVGVRCDHTHRVVSLNLTDSGIVGQLGPEIGNCSRLEYLDLAGNNLSGQIPHSFKNLHKLKILSLSYNLLTGEIPDFLTQIPQLYLVDLSHNSLSGSIPTSIGNMSQLLMLYLQGNHLSGTIPSSFGNCSKLQELFLNKNELQGVLPLSLNNLNDLTYLDVSRNSLRGTIPLGSGSCKNLQFLDLSFNVFSGGVPSSLGNCTSLSQFGAVHCNLVGNIPTSIGLLTELSLLRLPENHLTGRIPPEIGNCKSLEELHLYSNRLEGKIPSELGKLSELKDLELFSNQLTGEIPLSIWKIKGLQYLLVYNNSLSGELPLEMTELKHLKNISLFDNHFSGVIPQSLGINSSLLQLDFTNNKFSGNIPPNLCFGKKLSILNMGINQLQGTIPPDVGSCPTLRRLILKQNNFTGPLPNFKGNPNLAYMDISNNKIDGAIPSSLGNCRHLTDLILSTNNFSGLIPSELGNLVNLRTLNLAHNNLEGPLPSQLSNCTNMDRFDVGFNFLNGSLSSSLQSWTGLSALILSENHFCGGIPAFLSGFKKLSELQLGGNMFGGRIPGSIGALQNLDYGLNLSSNGLIGDIPVEIGKLKMLQKLDLSQNNLTGSIEVLDELLSLVEVNISYNSFYGPVPKMLTKLLNSPLSSFLGNPGLCINCSPSDGLACTESSYIKQCENKSTKQKGLSKVEIVMIALGSSIFVVLLLLALVYIFSFGRKSKQEVHISAKEGSSSLLNKVMEATENLDDRYIIGRGAHGVVYKALIGPDKAYAVKKLGFAASKGKNPSMVREIQTLGKIRHRNLVKLEDFWLRKDYGLILYSYMPNGSLHDVLHEKTPQPTLEWNVRYRIAIGIAHGLDYLHYDCDPPIVHRDIKPKNILLDSDMEPHIADFGIAKLLDQSSTSYPSISVPGTVGYIAPENAYTTANSRESDVYSYGVVLLELITRKKAVDPSFMEGTDIVSWVWSVWRETGEINQIADSSLAEEFLDSHIMEKVTKVLMVALRCTEKDSHKRPTMRDVTNQLSDANPRTTSTKG* | 1077 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr2g2664 | 1076 | Pfam | Leucine rich repeat N-terminal domain | 19 | 59 | IPR013210 | - | |
Apr2g2664 | 1076 | SUPERFAMILY | Protein kinase-like (PK-like) | 773 | 1064 | IPR011009 | - | |
Apr2g2664 | 1076 | Gene3D | Phosphorylase Kinase; domain 1 | 755 | 864 | - | - | |
Apr2g2664 | 1076 | SUPERFAMILY | RNI-like | 379 | 688 | - | - | |
Apr2g2664 | 1076 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 910 | 922 | IPR008271 | GO:0004672|GO:0006468 | |
Apr2g2664 | 1076 | SMART | LRR_typ_2 | 302 | 325 | IPR003591 | - | |
Apr2g2664 | 1076 | SMART | LRR_typ_2 | 157 | 181 | IPR003591 | - | |
Apr2g2664 | 1076 | SMART | LRR_typ_2 | 637 | 663 | IPR003591 | - | |
Apr2g2664 | 1076 | SMART | LRR_typ_2 | 516 | 540 | IPR003591 | - | |
Apr2g2664 | 1076 | SMART | LRR_typ_2 | 109 | 133 | IPR003591 | - | |
Apr2g2664 | 1076 | SMART | LRR_typ_2 | 277 | 301 | IPR003591 | - | |
Apr2g2664 | 1076 | SMART | LRR_typ_2 | 205 | 229 | IPR003591 | - | |
Apr2g2664 | 1076 | ProSiteProfiles | Protein kinase domain profile. | 788 | 1071 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr2g2664 | 1076 | MobiDBLite | consensus disorder prediction | 1060 | 1076 | - | - | |
Apr2g2664 | 1076 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 4 | 83 | - | - | |
Apr2g2664 | 1076 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 80 | 1061 | - | - | |
Apr2g2664 | 1076 | Gene3D | Ribonuclease Inhibitor | 174 | 273 | IPR032675 | - | |
Apr2g2664 | 1076 | ProSiteProfiles | Leucine-rich repeat profile. | 639 | 661 | IPR001611 | GO:0005515 | |
Apr2g2664 | 1076 | Gene3D | Ribonuclease Inhibitor | 283 | 444 | IPR032675 | - | |
Apr2g2664 | 1076 | SUPERFAMILY | RNI-like | 66 | 418 | - | - | |
Apr2g2664 | 1076 | ProSitePatterns | Protein kinases ATP-binding region signature. | 794 | 817 | IPR017441 | GO:0005524 | |
Apr2g2664 | 1076 | Gene3D | Ribonuclease Inhibitor | 18 | 173 | IPR032675 | - | |
Apr2g2664 | 1076 | MobiDBLite | consensus disorder prediction | 1051 | 1076 | - | - | |
Apr2g2664 | 1076 | Gene3D | Transferase(Phosphotransferase) domain 1 | 865 | 1075 | - | - | |
Apr2g2664 | 1076 | SMART | serkin_6 | 788 | 1071 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr2g2664 | 1076 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN XA21 | 80 | 1061 | - | - | |
Apr2g2664 | 1076 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN XA21 | 4 | 83 | - | - | |
Apr2g2664 | 1076 | Gene3D | Ribonuclease Inhibitor | 445 | 726 | IPR032675 | - | |
Apr2g2664 | 1076 | Pfam | Protein kinase domain | 793 | 1062 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr2g2664 | 1076 | Pfam | Leucine rich repeat | 86 | 146 | IPR001611 | GO:0005515 | |
Apr2g2664 | 1076 | Pfam | Leucine rich repeat | 469 | 529 | IPR001611 | GO:0005515 | |
Apr2g2664 | 1076 | Pfam | Leucine rich repeat | 159 | 218 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr2g2664 | Apr-Chr2 | 30347504 | 30351107 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr2g2664 | 9 | 1067 | Receptor kinase-like Gene Family | AT1G73080 | 52.785 | 0.0 | 1051 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Apr2g2664 | Pkinase | 7e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr2g2664 | - | - | gmx:100778035 | 1684.08 |