Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2662 ATGGGTTCTGTAGAGGACAAGATAGACGTTGATTACGATGATGACACTCCCTTCTCCTCTTCGCCCTCCGCCTCTAAAGTTCACACTTTCAATTTCGAGACAAGCGTTGATTTACGCAAATCCTCCCTCTTTAACATTCTACGGATAACACGTTTCAGCAGGAGTATTTATGTGGTCTTAATCAAAGCAAAGATCAACATGCTCCTTCCCTTTGGTCCATTGGCCATTTTACTACATTACCTAACCGGACATCATGCATGGGTGTTCTTCTTCACCTTATTGGGTATTACTCCTTTGGCGGAACGACTGGGTTATGCTACCGAGCAGCTTGCCCTCTACACTGGACCAACAGTTGGGGGTCTGCTTAATGCCACGTTTGGCAATGCAACTGAAATGATTATATCAATTTATGCATTGAAAAGCGATATGATTAGGGTTGTTCAGCAATCTTTGCTTGGTTCAATCTTGTCAAATATGCTTCTGGTTCTTGGGTGTGCTTTCTTCACTGGTGGCCTTGTCCACTACCAGAAAAAAGTACAGTTTTTTGATAAGGCAGCTGCTATTGTCAATTCTGGGTTGCTGTTGATGGCAGTAATGGGAATACTATTTCCTGCTGTGCTTCACTTTACTCACTCAGAGGTTCATCTTGGGAAGTCAGTGTTATCTCTATCAAGATTTAGCAGCTGCATAATGCTAGTGGCATATGCAAGCTACCTTTTCTTTCAACTTAGAAGCCAGCAAAATGTTTATAGTCCAGTTGATGAGGAAGGAGATAATGAAGAAAGTTCTGATGAGGAGGAAGAAATTGAATTAACTCAATGGGAAGCAATAGTCTGGCTTGCTATTTTGACGGCATGGGTATCTATATTGTCTGGCTACCTTGTAGATGCCATAGAGGGAGCATCTGAGTCAATGAATATGTCAGTGGCCTTTATTAGTGTCATTTTGCTTCCAATTGTAGGCAATGCTGCAGAACATGCTAGTGCTATCATGTTTGCCGTGAAGGACAAGCTTGATATCACAATTGGAGTTGCTGTTGGATCATCTACACAGATATCTATGTTCGTGATCCCCTTCTGTGTGGTTGTTGGATGGTGCATGGGGAAAGAAATGGACCTGAATTTTCAACTCTTTGAGACTGCCACACTTTTTATCACTGTGTTGGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAATTACTTTAAAGGCTTGATGCTTATTCTATGCTATCTTATAGTTGCTGCCAGTTTTTTTGTGCATGTAGACCCTAAAAGTGGTGATGACTAA 1290 0.4163 MGSVEDKIDVDYDDDTPFSSSPSASKVHTFNFETSVDLRKSSLFNILRITRFSRSIYVVLIKAKINMLLPFGPLAILLHYLTGHHAWVFFFTLLGITPLAERLGYATEQLALYTGPTVGGLLNATFGNATEMIISIYALKSDMIRVVQQSLLGSILSNMLLVLGCAFFTGGLVHYQKKVQFFDKAAAIVNSGLLLMAVMGILFPAVLHFTHSEVHLGKSVLSLSRFSSCIMLVAYASYLFFQLRSQQNVYSPVDEEGDNEESSDEEEEIELTQWEAIVWLAILTAWVSILSGYLVDAIEGASESMNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAVGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKSGDD* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2662 429 Pfam Sodium/calcium exchanger protein 85 243 IPR004837 GO:0016021|GO:0055085
Apr2g2662 429 Pfam Sodium/calcium exchanger protein 277 416 IPR004837 GO:0016021|GO:0055085
Apr2g2662 429 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 426 IPR004713 GO:0006812|GO:0008324|GO:0016021
Apr2g2662 429 TIGRFAM caca2: calcium/proton exchanger 58 419 - -
Apr2g2662 429 TIGRFAM cax: calcium/proton exchanger 68 419 IPR004798 GO:0006816|GO:0015369
Apr2g2662 429 PANTHER VACUOLAR CATION/PROTON EXCHANGER 1 426 - -
Apr2g2662 429 Gene3D - 263 420 IPR044880 -
Apr2g2662 429 Gene3D - 116 255 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2662 Apr-Chr2 30333620 30339287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2662 54 424 Antiporters AT3G13320 77.151 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2662 K07300 - gmx:100806000 713.375