Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2660 ATGGACTCAACAACTACGTTGTTGTTGCTGTTCCTTCTTTCAGCTTCAGTTTGTTGCCATGGTTCTATTATCGTATCCAAGGATGGGAGTGGAGATTATACAACGGTGGGTGAAGCCATTTTGAATGCTCCGGACTTGAGTGACAAACCTTACACTATTCACGTTCGACAAGGTACTTATGAAGAGTACGTAGTCATTCCTCCTGAGAAGACTAATATTAAACTCGTTGGAGATGGACCTCAACACACCAAAATAGTTGGCTACCAAAACGGTTTCACCATAGATATCCGTGGAGAAGGGTTCATGGCAGAAAACATGGGATTTGTGAACTGGGCAGGGCTAAACGCAAGCGCTGCAGTGGCGGTTCGGAACGAGGCGAACAAGAGCGTATTCTTCCAATGCTCCATCGAAGGATTCCAAGACACGCTGTGGACGGTTGCGGGGCGACAATTCTACAAAAACTGCGACATATATGGCACCGTTGACTTCATCTACGGCGACGCAGCAGCAGTGTTTCAAGACTGCACGGTGTACGCGCGTTATCGCGAGTACGTGACGTTCACTGCTCAGTCACGAGACGACCCAAAGGAGAAAACAGGGTTCACATTCCAAAGATGCAAGTTCACTATGTCCCCTGAGGACTCCCACAGAAAATCAGAGGTCCATGCCACCTTGGGCCGTCCCTTGAGGCCCTATTCCACAGTGGCCATCTTACAGTCTTTCATTGACTCCATGGTGGACCCTAAAGGTTGGGAGCCCATGCCCCACCAGCCCACTGACAAAGCCTCCTACATCGAGTTTGAAAATGTTGGGCCGGGCTCAAATACTGATCAAAGAGTTGACTGGCCCGGTGTTAGACTCCTTCACTACCCAATCCAAGCAGCCCCTTTCACTGCTTCCCGTCTCTTGGACGCCGACTCTTGGATCCCCTCCACCGGTGTTCCCTACGATAATGGACTCTAG 963 0.5005 MDSTTTLLLLFLLSASVCCHGSIIVSKDGSGDYTTVGEAILNAPDLSDKPYTIHVRQGTYEEYVVIPPEKTNIKLVGDGPQHTKIVGYQNGFTIDIRGEGFMAENMGFVNWAGLNASAAVAVRNEANKSVFFQCSIEGFQDTLWTVAGRQFYKNCDIYGTVDFIYGDAAAVFQDCTVYARYREYVTFTAQSRDDPKEKTGFTFQRCKFTMSPEDSHRKSEVHATLGRPLRPYSTVAILQSFIDSMVDPKGWEPMPHQPTDKASYIEFENVGPGSNTDQRVDWPGVRLLHYPIQAAPFTASRLLDADSWIPSTGVPYDNGL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2660 320 SUPERFAMILY Pectin lyase-like 19 318 IPR011050 -
Apr2g2660 320 PANTHER PECTINESTERASE 1 319 - -
Apr2g2660 320 Pfam Pectinesterase 23 305 IPR000070 GO:0030599|GO:0042545
Apr2g2660 320 Gene3D - 18 320 IPR012334 -
Apr2g2660 320 PANTHER PECTINESTERASE 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2660 Apr-Chr2 30325773 30328140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2660 12 316 Carbohydrate Esterase AT5G49180 39.812 9.63e-78 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2660 K01051 - gmx:102665195 514.612