Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2655 ATGGCCTATGATAGAGTTATCCTAATTGGATTGTTTGGGATGTCACAGGAAAACAACACTAACGCTCCTAACACTAACACAAACAAGGTCAAGCGCTCACGCAAAACCAACCCAAGACACTCTCCTTCCCAGCGAAGCTCAATCTACCGTGGCGTTACAAGGCATCGATGGACAGGTCGATACGAGGCTCATCTGTGGGATAAGACTTGCTGGAACGAATCGCAGACCAAGAAAGGAAGACAAGTATATCTCGGGGCATATAACGACGAAGATGCGGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAAGATACCATTCTCAATTTTCCGCTATCCAATTATCAAGACGAGCTTAAGGAGATGGAGGATCAATCAAAGGAAGAATATATTGGATCCTTAAGAAGAAAAAGTAGCGGCTTTTCTCGCGGAGTCTCAAAATATAGAGGCGTGGCAAGACACCATCATAATGGAAGGTGGGAAGCTCGAATTGGCAGGGTGTTCGGCAACAAATATCTATACCTTGGAACTTACGCCACACAAGAAGAAGCAGCAATGGCGTACGATATGGCGGCCATAGAGTACCGTGGACATAACGCCGTCACAAACTTCGACCTTAGTCGTTACATCAAATGGCTACATCCTAATACCCAAGACGAAGACAAGCGTAAAACTCCAAGCAAGACTGATCCTGAACTTGGAACAAACGAGATCACAACAGCAGCTACACCACTATCTGGTAATGGCACTACTGCCACCACCACATCTTCTGCATTGGGCCTTCTTTTACAGTCATCCAAATTCAAAGAAATGCTACAAAGGACTTCAGCTGAAGATTACCCTCCACCACCTCCTCCTCGTACATTCCCCGATGATATTCAAACCTTTTTCGAAAATCACGATTCTGGAATCTATGCTGAGACTGATGACATTATATTTGGCGATTTGACGTCAATTGCGTCACCATTTTTTCATTGTGAGCTTAATGCTTAA 1002 0.4501 MAYDRVILIGLFGMSQENNTNAPNTNTNKVKRSRKTNPRHSPSQRSSIYRGVTRHRWTGRYEAHLWDKTCWNESQTKKGRQVYLGAYNDEDAAARAYDLAALKYWGQDTILNFPLSNYQDELKEMEDQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAMAYDMAAIEYRGHNAVTNFDLSRYIKWLHPNTQDEDKRKTPSKTDPELGTNEITTAATPLSGNGTTATTTSSALGLLLQSSKFKEMLQRTSAEDYPPPPPPRTFPDDIQTFFENHDSGIYAETDDIIFGDLTSIASPFFHCELNA* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2655 333 ProSiteProfiles AP2/ERF domain profile. 150 208 IPR001471 GO:0003700|GO:0006355
Apr2g2655 333 MobiDBLite consensus disorder prediction 17 31 - -
Apr2g2655 333 SMART rav1_2 150 214 IPR001471 GO:0003700|GO:0006355
Apr2g2655 333 SMART rav1_2 48 120 IPR001471 GO:0003700|GO:0006355
Apr2g2655 333 SUPERFAMILY DNA-binding domain 149 210 IPR016177 GO:0003677
Apr2g2655 333 ProSiteProfiles AP2/ERF domain profile. 48 114 IPR001471 GO:0003700|GO:0006355
Apr2g2655 333 MobiDBLite consensus disorder prediction 17 49 - -
Apr2g2655 333 SUPERFAMILY DNA-binding domain 47 116 IPR016177 GO:0003677
Apr2g2655 333 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 17 317 - -
Apr2g2655 333 CDD AP2 149 210 IPR001471 GO:0003700|GO:0006355
Apr2g2655 333 MobiDBLite consensus disorder prediction 220 256 - -
Apr2g2655 333 Gene3D AP2/ERF domain 48 116 IPR036955 GO:0003700|GO:0006355
Apr2g2655 333 Gene3D AP2/ERF domain 149 210 IPR036955 GO:0003700|GO:0006355
Apr2g2655 333 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Apr2g2655 333 PRINTS Ethylene responsive element binding protein signature 190 210 IPR001471 GO:0003700|GO:0006355
Apr2g2655 333 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 17 317 - -
Apr2g2655 333 Pfam AP2 domain 48 106 IPR001471 GO:0003700|GO:0006355
Apr2g2655 333 Pfam AP2 domain 149 201 IPR001471 GO:0003700|GO:0006355
Apr2g2655 333 MobiDBLite consensus disorder prediction 234 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2655 Apr-Chr2 30284855 30290305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2655 44 254 AP2-EREBP Transcription Factor Family AT5G57390 61.404 1.92e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Apr2g2655 AP2 1.4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2655 K09285 - rcu:8280276 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2655 2 30284855 30290305 Apr2g2655 2 30284855 30290305 ECH