Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2651 ATGGTTTTCTTAGAAATGTTCTTCTTCCTTTTACTTGCAACATTTGGTTACTCGATCTCCCTTCCAAGGCACCACCATCCTCACCCTTCTCATTCTTTACTCACGGATAAAGCTGCTCTTTTGGAATTCAAAAAAACAATCATATCAGACCCTCATTCCTCACTTGCTAACTGGGACGAAGCTGTTCATGTGTGCAACTTCACTGGTGTTGAATGTGACAAATTCCATCACCGTGTTATAGGACTAATCTTGTACGATAAAGGTCTAGTAGGGCTCCTTTCACCTGTTCTTTCCAATCTTACTGGATTGCACACCCTTGAGATTGTTCACAGTCTCTTATTTGGCATTATTCCGCCTGAATTTTCCTCACTCAGACGCATTCATAGTATCATTCTTGAGGGGAACAATCTGCATGGTCCAATACCACAGTCATTTTCCCAGCTTTCCAAGCTTTACATTCTAGTTATTAAAGAAAATAACATAACAGGTTCACTTCCTCCATCTCTCTTTTCCAATTGCACTCAACTAGACGTTGTGGACTTCTCCAGCAACTCCCTAAGTGGTCAAATCCCACAAGAGATTGGAAACTGCCCAGGCTTGTGGAGTCTCAGTTTGTACAGTAATCAATTTACTGGACACCTTCCTCTCTCTTTGAAGAATCTATCACTTCAAAATTTAGATGTGGAGTACAATTATCTATCTGGTGAATTGCCTACGAAGTTTGTAAGCAGTTGGCCAAATCTCCTTTACCTTCATTTATCATACAACAATATGGTAAGTCATGATAGCAACACCAATCTTGATCCATTTTTCACGGCACTTAAAAACAACAGTGCTCTAGAGGAGCTTGAATTGGCAGGAATGGGCCTTGGGGGAAGGTTCTCCAACACTGTTGCCACCCAACTCACTAGTCTAAAATATCTACTCATGCAGGAAAACCAAATTTTTGGATCAATTCCTCACAGCTTAGCAAACCTTTCAAGGCTTTTGATCCTGAATTTAACATCCAATCTTCTAAATGGAACCCTGTCCTCTGAGATCTGCAGATTACCAAACTTGGAACAGCTTTTCTTATCACATAACCTTTTCAAAACTTCAATTCCAGAAGCATTAGGCAAGTGTCTTAATCTGGGTCTACTTGATCTCTCACACAATCAATTTTCAGGTAGGATTCCAGAAAGTTTGGGAAATTTGGTTCGACTGAATTATTTGTTTCTCAACAATAACCTTCTCTCAGGAACAATACCTCCTACATTGGGACGGTGTACTAATCTGTACAAGCTTGACTTGTCCTATAATAGATTAACAGGAAGCATCCCACTAGAACTCACAGGCTTGCATGAGATCAGAATTTTCATAAATGTCTCTCATAACCATCTTGAAGGTCCCCTGCCAATTGAGCTCAGCAAATTGGAAAAGGTTCAGGAAATGGATCTGTCATCTAATTACCTCACTGGAAGTATCTTCCCACAGATAGCAGGATGCATTGCTGTTTCAATGATAAATTTTTCAAACAATTTTCTTCAAGGTGAGCTCCTACAGTCCCTAGGTGATCTCAAGAACCTCGTATCTTTTGATGTTTCAATAAATCAATTATCTGGAAGGATACCTGCAACACTTGGTAAAATTGACACACTCACTTTTCTCAATTTATCATTTAACAACCTGGAAGGAAAGGTTCCATCTGGTGGTATCTTTAATTCAGTGTCATATTTGTCATTCTTAGGAAATCCACAACTTTGTGGGACAATTCCAGGCATATCATTGTGCTCTCAAAGGAGAAGATGGTTACACACTCGTTTGTCCTTGATTATATTTATTTTGGTCATCTTCATATCAACATTCTTGTCAATAATTTGCTGTGTAGTTGGATGCAAGCGTCTTAAACTAATCATCTCCTCTCGAAGGACAGAGGCATACAAAAGAGCAGCTAGACCTGAACTGATAAGTAACTTCCCAAGAATCACATATAAGGAACTCTCAGATGCCACCGAAGGATTTGACAATCAGAGACTTATTGGATCAGGTAGTTATGGACGTGTCTATAGGGGAGTTCTTATGGACGGGACACCAATAGCAATCAAGGTGTTGCATTTGCAATCTGGAAATTCTACCAAGAGTTTTAACAGAGAATGCCAAGTTTTGAAGAGAATTAGACACAGAAATCTGATAAGAATTATCACAGCATGTAGCCTACCTGATTTTAAGGCTCTTGTTCTACCTTACATGGCCAATGGGAGCTTGGAGAGCTGCCTCTATCCTTCTTGTGGATCATCAGACTTGAGTATTATCCAGAGGGTGAATATTTGCAGTGATATAGCCGAAGGGATGGCCTATTTGCATCATCATTCTCCAGTCAGAGTCATACACTGTGATCTCAAACCAAGCAATGTTCTCCTCAATGATGACATGACCGCTCTAGTTTCTGATTTTGGGATTTCGAGGCTAACTATGAGTGTTGGGGGAGGAAATGGTGGGGCCATTGATAACATGGGGAACTCTACTGTAAACTTGTTGTGTGGATCCATTGGATACATTGCACCAGATGATATGTTTGTTGGTGGGTTAAGTCTGCACAGATGGATAAAGAGTCACTTTCATGGAAGGGTAGAAAAAGTGGTAGATCCTGCTTTGGTGACAGCTTCAAGAGATCAATCCCAAGAGGTTAAAAAGATGTGGGAAGTTGCTATTGCGGAGTTAATTGAGTTGGGAATTCTTTGCACACAGGAATCACCTTCGACAAGACCAACCATGCTTGATGCAGCAGATGATTTAGATCGTCTCAAGAGATACCTTAATGGGGACACAACTGGAACTTTTGCCTCATCTCTTGGAATTTCATCTTCCACTATAGGTGATGATTATTGA 2868 0.4027 MVFLEMFFFLLLATFGYSISLPRHHHPHPSHSLLTDKAALLEFKKTIISDPHSSLANWDEAVHVCNFTGVECDKFHHRVIGLILYDKGLVGLLSPVLSNLTGLHTLEIVHSLLFGIIPPEFSSLRRIHSIILEGNNLHGPIPQSFSQLSKLYILVIKENNITGSLPPSLFSNCTQLDVVDFSSNSLSGQIPQEIGNCPGLWSLSLYSNQFTGHLPLSLKNLSLQNLDVEYNYLSGELPTKFVSSWPNLLYLHLSYNNMVSHDSNTNLDPFFTALKNNSALEELELAGMGLGGRFSNTVATQLTSLKYLLMQENQIFGSIPHSLANLSRLLILNLTSNLLNGTLSSEICRLPNLEQLFLSHNLFKTSIPEALGKCLNLGLLDLSHNQFSGRIPESLGNLVRLNYLFLNNNLLSGTIPPTLGRCTNLYKLDLSYNRLTGSIPLELTGLHEIRIFINVSHNHLEGPLPIELSKLEKVQEMDLSSNYLTGSIFPQIAGCIAVSMINFSNNFLQGELLQSLGDLKNLVSFDVSINQLSGRIPATLGKIDTLTFLNLSFNNLEGKVPSGGIFNSVSYLSFLGNPQLCGTIPGISLCSQRRRWLHTRLSLIIFILVIFISTFLSIICCVVGCKRLKLIISSRRTEAYKRAARPELISNFPRITYKELSDATEGFDNQRLIGSGSYGRVYRGVLMDGTPIAIKVLHLQSGNSTKSFNRECQVLKRIRHRNLIRIITACSLPDFKALVLPYMANGSLESCLYPSCGSSDLSIIQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGISRLTMSVGGGNGGAIDNMGNSTVNLLCGSIGYIAPDDMFVGGLSLHRWIKSHFHGRVEKVVDPALVTASRDQSQEVKKMWEVAIAELIELGILCTQESPSTRPTMLDAADDLDRLKRYLNGDTTGTFASSLGISSSTIGDDY* 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2651 955 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Apr2g2651 955 SUPERFAMILY RNI-like 82 388 - -
Apr2g2651 955 SMART serkin_6 667 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2651 955 Gene3D Ribonuclease Inhibitor 223 596 IPR032675 -
Apr2g2651 955 Gene3D Ribonuclease Inhibitor 35 151 IPR032675 -
Apr2g2651 955 Gene3D Ribonuclease Inhibitor 152 222 IPR032675 -
Apr2g2651 955 SUPERFAMILY Protein kinase-like (PK-like) 646 925 IPR011009 -
Apr2g2651 955 Gene3D Phosphorylase Kinase; domain 1 648 742 - -
Apr2g2651 955 Gene3D Transferase(Phosphotransferase) domain 1 743 850 - -
Apr2g2651 955 ProSiteProfiles Protein kinase domain profile. 667 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2651 955 Pfam Leucine rich repeat 150 210 IPR001611 GO:0005515
Apr2g2651 955 PANTHER OS04G0122200 PROTEIN 850 934 - -
Apr2g2651 955 PANTHER OS04G0122200 PROTEIN 25 848 - -
Apr2g2651 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Apr2g2651 955 SMART LRR_typ_2 350 374 IPR003591 -
Apr2g2651 955 SMART LRR_typ_2 302 326 IPR003591 -
Apr2g2651 955 SMART LRR_typ_2 398 422 IPR003591 -
Apr2g2651 955 SMART LRR_typ_2 148 172 IPR003591 -
Apr2g2651 955 Gene3D Transferase(Phosphotransferase) domain 1 851 930 - -
Apr2g2651 955 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Apr2g2651 955 SUPERFAMILY L domain-like 331 582 - -
Apr2g2651 955 Pfam Protein kinase domain 668 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2651 955 PANTHER OS06G0186100 PROTEIN 25 848 - -
Apr2g2651 955 PANTHER OS06G0186100 PROTEIN 850 934 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2651 Apr-Chr2 30260269 30263761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2651 35 915 Receptor kinase-like Gene Family AT3G47570 32.045 7.33e-141 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Apr2g2651 Pkinase 8.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2651 - - gmx:100815766 1555.81