Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2648 ATGCTGTCATATGTTGATCCTATGTTGTATAATTCTACTGGAATCAATGAAGTGCTTAGATGGATGATGCTTTTACCTCATGCTTTCAGCAATAAGCAAACCTTCATAATGGTGGATCTCAAAGAGAGGTTACTCCCACCAAAACCTGCATCAGCTTTAAACCTAAGAGAGGCGACCAATCGACCATCTGCCTCTGGAAGGCAATCTTTTCAAGGAGTGGATGTTCTGGGTCTAAAGAAGCGAGGCCAAGGTCTCCGATCATGGATTCGTGTCGACACGTCTGGAAACTCTCAGGCCATTGAGGTAGACAAGTTTACCATGATGCGACGTTGTGATCTACCAGCACGTGATCTTCGTCTACTTGATCCTCTGTTTGTCTACCCGTCAACAATCCTTGGTAGGGAAAAGGCAATTGTTGTAAATCTAGAGCAGATTCGGTGTATTATAACGGCAGATGAGGTTCTTCTCTTGAATTCCCTTGATAGTTATGTATTGCACTATGTGATGGAGCTACAACGGCGGTTGACAACAACTGGGGTAGGTGAGGTTTGGCAACCAGACGATTCTGACATGAACCGAAGGAGAGGAAGTAGGAGTTTTGAAAATTCTTTTAGCAACTGCTCCCCTGATTATTTACCTTTTGAGTTCAGGGCTCTTGAAGTTGCCCTGGAGGCAGCATGCACATTTCTAGACTCCCAGGCAGCAGAGTTAGAAATTGAGGCTTATCCGTTGTTGGATGAACTGACATCAAAGATCAGTACTCTAAACTTGGAACGTGTTCGTCGGTTGAAAAGCAGACTTGTTGCCCTGACTCGGAGGGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTTATGGATGATGATGGTGATATGGCTGAAATGTATCTTACTGAGAAGAAAAGACGGATGGAGTTGTCATTTTATGGAGATCAGTCTATGGTTGGATATAAATCAGTTGATGGGGCATCCATTTCTGCTCCAGTCTCTCCTGTTTCATCACCTCCTGATTCTCGCAGGCTTGAAAAGAGCTTGAGCATTGCTAGGAGTCGACATGAGAGCATGAGGAGTTCTGAAAGTACCACGGAAAATATAGAGGAGCTTGAGATGTTGCTGGAAGCATACTTCGTTGTCATTGACAGCACTCTGAACAAGTTGACATCGTTGAAAGAGTACATTGATGACACAGAAGATTTCATTAACATTCAACTGGACAACGTACGGAATCAGCTTATCCAGTTTGAGCTTTTACTCACAACTGCAACATTTGTTGTTGCCATCTTTGGAGTGGTAGCAGGAATATTTGGGATGAATTTTGAAATTCCATTATTCAATGTCCCCTCTGCATTCCAATGGGTCCTCGTAATAACAGGAGTTTGTGGAGTCTTCATATTTTCTGCATTCGTATGGTTCTTCAAGTATAGAAGACTCATGCCCCTATAG 1440 0.4319 MLSYVDPMLYNSTGINEVLRWMMLLPHAFSNKQTFIMVDLKERLLPPKPASALNLREATNRPSASGRQSFQGVDVLGLKKRGQGLRSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTTTGVGEVWQPDDSDMNRRRGSRSFENSFSNCSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMELSFYGDQSMVGYKSVDGASISAPVSPVSSPPDSRRLEKSLSIARSRHESMRSSESTTENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPLFNVPSAFQWVLVITGVCGVFIFSAFVWFFKYRRLMPL* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2648 479 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 39 479 IPR039204 -
Apr2g2648 479 Gene3D - 76 159 - -
Apr2g2648 479 Gene3D Magnesium transport protein CorA, transmembrane region 417 477 - -
Apr2g2648 479 Gene3D Magnesium transport protein CorA, transmembrane region 167 410 - -
Apr2g2648 479 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 416 469 IPR045863 -
Apr2g2648 479 CDD Mrs2_Mfm1p-like 88 476 IPR039204 -
Apr2g2648 479 PANTHER MAGNESIUM TRANSPORTER MRS2-10 39 479 - -
Apr2g2648 479 Coils Coil 260 287 - -
Apr2g2648 479 Pfam CorA-like Mg2+ transporter protein 366 467 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2648 Apr-Chr2 30246213 30250093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2648 37 479 MRS2 Gene Family AT1G16010 86.937 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2648 K16075 - gmx:100779803 792.341