Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr2g2645 | ATGCCTTCAAGACCATTCCCTCCTGCAAGTCCCAGTCTTTTCACCAAAACTAAAGTTCTCTTCCTAGCACTCACCATTTCAGCTTCTGTTGTGATTTTCTGCTCAATCCTTTACTTCCTCTACCATCTCTGGCATTCTCTTGTTCACAGAGCTAAGACTATCCCCTTTGATGCAAGTGCTCCCTTGAAGCTCCAAAGATTTTCGTACAAAGATTTAAAGCAAGCCACCAGTGGCTTTGACACTGCCAATGTCATTGGTAAAGGTGGCTCTGGCACTGTCTTCAGGGGAATACTCAAAGATGGTAAATTGATTGCCATCAAGCGCTTGGACGCGTTGTCTTTGCAGGCAGAGCGAGAGTTTCAAAATGAGCTTCAGATTCTGGGAGGGTTAAGGTCACCATTCCTGGTCACCCTTTTGGGTTACTGTGTGGAAAAGAACAAAAGATTGTTGGTGTATGAGTATATGCCCAACAGAAGCTTACAGGAGTCCCTCTTTGGAGAAGGGTGTTTGAGTTTGAGTTGGGAGATGAGGTTTTGGGTTATATTGGATGTTGCTAGAGCATTGGAGTTCTTGCACCTTGGATGTGATCCACCAGTGATCCATGGTGATATCAAGCCAAGCAATGTTCTGCTTGATGCAGAGTGCCGTGGGAAGATCTCAGATTTTGGATTGTCAAGGATTAAGGTGGAGGGTGAATTTGGTGTAGACTTGTTTAGCCAGGATCTTGGCAAGAGCCAGGAGCTATGGAAAAGCCAAGATCTTTCAGGTAATTTAACTGCTGAAACCCCGGCTATTGGTACTCCAGTTGAGAGTGTTAATGAGGTAGATTTTGCTCTAGCTTTGCAAGCCTCTTCTTCATCCAAAAATAGTAGGACATGCTTTAATGTTAAATCTTTAAACTTGAATTCTTTGAATTATAATGCCAATATTGTCAGTGAAAGTGAAAGTAGGAGTACAAATGCAAAGGGTAAGGAAATTTCAACTTTGGATATAGGAGGGGATGATTGGAATACTAAATTTGTTCCTTATGATGATGAGTTTTCTAGCATTGATTATAGTAAGGAGTTGACTGCCAATGCTTCTTCTTTGGTGGATGATGAGAAGGCAAATGGGAAACAATGGGGAAAGGACTGGTGGTGGAGACAGGATGGAAGTGGTGAATTATGTAGTAAAGACTATGTCATGGAGTGGATAGGGAGTCAGATTTGTCCATCAAACCCTGATTGGGATGATGGTAAGAACAATATCCAAGAGAAAGTAGAAATGGAAAATTCAAGTCCAATAGATAAAGACAATGATGCAATTGCACCCCAATCCCAGGTGTTCCGGATAGGACAAACAGATAACGTGGTTGAGGAAAAAGAATCAAGGGGAAAGAAAAATCACAAGAATAAGCACAGGAAGATGCAAGAGTGGTGGAAAGAAGAGCATCTTGCAGAATTAAGCAAGAAGACCACTAAGCTGAAAAATCTTCATGCTAAGTGGAAGAAAGGCTTGAAAGTGCCCCATTTTGATTTGGGTAGAAGGTTTTATCTTTGCAGACGTAAGAAGTTTGGAGAGGAGGATCAGAATGAGTGCGATCAAAATGGGGAGTTTAGCTTCAGAAGAGGCTGGAAGAAGAAAAGTACTCGTTCCATTGGAAGTGACATGTGGAGTGGAGATCTTTTCAGCCGCGAGCTTAGCAGCACAACTAGCATGAGAGGGACACTGTGTTATGTGGCACCAGAATATGGAGGGTGTGGGTTCTTAATGGAGAAGGCTGACATTTATAGTTTTGGTGTTTTGATTCTTGTAATTGTGTCAGGTAGAAGACCATTACATGTTCTTGCATCTCCCATGAAGCTAGAGAAAGCTAACTTAATAAGCTGGTGTAGACACTTGGCTCATGCTGGTGACATTTTAGAACTAGTGGATGAGAGAATGAAAGAAGATTACAACAAGGACCAAGCAAGCTTGTGTATCAACTTGGCCCTCATTTGCTTACAGAAAATTCCGGAGTTACGGCCAGATATTGGGGATATTGTCAAGATTTTGAAGGGTGAGATGGACCTTCCACCTCTTCCATTTGAGTTCTCCCCTTCTCCACCTTCCAGATTATACAGCAGATCAAGAAGGAAACCAAAGGGCACTGCAGAATAA | 2139 | 0.4231 | MPSRPFPPASPSLFTKTKVLFLALTISASVVIFCSILYFLYHLWHSLVHRAKTIPFDASAPLKLQRFSYKDLKQATSGFDTANVIGKGGSGTVFRGILKDGKLIAIKRLDALSLQAEREFQNELQILGGLRSPFLVTLLGYCVEKNKRLLVYEYMPNRSLQESLFGEGCLSLSWEMRFWVILDVARALEFLHLGCDPPVIHGDIKPSNVLLDAECRGKISDFGLSRIKVEGEFGVDLFSQDLGKSQELWKSQDLSGNLTAETPAIGTPVESVNEVDFALALQASSSSKNSRTCFNVKSLNLNSLNYNANIVSESESRSTNAKGKEISTLDIGGDDWNTKFVPYDDEFSSIDYSKELTANASSLVDDEKANGKQWGKDWWWRQDGSGELCSKDYVMEWIGSQICPSNPDWDDGKNNIQEKVEMENSSPIDKDNDAIAPQSQVFRIGQTDNVVEEKESRGKKNHKNKHRKMQEWWKEEHLAELSKKTTKLKNLHAKWKKGLKVPHFDLGRRFYLCRRKKFGEEDQNECDQNGEFSFRRGWKKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAHAGDILELVDERMKEDYNKDQASLCINLALICLQKIPELRPDIGDIVKILKGEMDLPPLPFEFSPSPPSRLYSRSRRKPKGTAE* | 713 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr2g2645 | 712 | PANTHER | OS08G0275200 PROTEIN | 1 | 711 | - | - | |
Apr2g2645 | 712 | Gene3D | Transferase(Phosphotransferase) domain 1 | 531 | 684 | - | - | |
Apr2g2645 | 712 | Gene3D | Transferase(Phosphotransferase) domain 1 | 155 | 266 | - | - | |
Apr2g2645 | 712 | SUPERFAMILY | Protein kinase-like (PK-like) | 59 | 698 | IPR011009 | - | |
Apr2g2645 | 712 | MobiDBLite | consensus disorder prediction | 688 | 712 | - | - | |
Apr2g2645 | 712 | SMART | serkin_6 | 79 | 677 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr2g2645 | 712 | Pfam | Protein kinase domain | 81 | 229 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr2g2645 | 712 | ProSiteProfiles | Protein kinase domain profile. | 79 | 687 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr2g2645 | 712 | PANTHER | OS07G0586332 PROTEIN | 1 | 711 | IPR044576 | - | |
Apr2g2645 | 712 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 199 | 211 | IPR008271 | GO:0004672|GO:0006468 | |
Apr2g2645 | 712 | Coils | Coil | 474 | 494 | - | - | |
Apr2g2645 | 712 | MobiDBLite | consensus disorder prediction | 446 | 468 | - | - | |
Apr2g2645 | 712 | Gene3D | Phosphorylase Kinase; domain 1 | 46 | 154 | - | - | |
Apr2g2645 | 712 | ProSitePatterns | Protein kinases ATP-binding region signature. | 85 | 107 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr2g2645 | Apr-Chr2 | 30236899 | 30239037 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr2g2645 | 546 | 678 | Receptor kinase-like Gene Family | AT3G58690 | 30.597 | 3.52e-13 | 70.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XI | Apr2g2645 | Pkinase | 1.8e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr2g2645 | - | - | ccaj:109812677 | 1264.6 |