Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2645 ATGCCTTCAAGACCATTCCCTCCTGCAAGTCCCAGTCTTTTCACCAAAACTAAAGTTCTCTTCCTAGCACTCACCATTTCAGCTTCTGTTGTGATTTTCTGCTCAATCCTTTACTTCCTCTACCATCTCTGGCATTCTCTTGTTCACAGAGCTAAGACTATCCCCTTTGATGCAAGTGCTCCCTTGAAGCTCCAAAGATTTTCGTACAAAGATTTAAAGCAAGCCACCAGTGGCTTTGACACTGCCAATGTCATTGGTAAAGGTGGCTCTGGCACTGTCTTCAGGGGAATACTCAAAGATGGTAAATTGATTGCCATCAAGCGCTTGGACGCGTTGTCTTTGCAGGCAGAGCGAGAGTTTCAAAATGAGCTTCAGATTCTGGGAGGGTTAAGGTCACCATTCCTGGTCACCCTTTTGGGTTACTGTGTGGAAAAGAACAAAAGATTGTTGGTGTATGAGTATATGCCCAACAGAAGCTTACAGGAGTCCCTCTTTGGAGAAGGGTGTTTGAGTTTGAGTTGGGAGATGAGGTTTTGGGTTATATTGGATGTTGCTAGAGCATTGGAGTTCTTGCACCTTGGATGTGATCCACCAGTGATCCATGGTGATATCAAGCCAAGCAATGTTCTGCTTGATGCAGAGTGCCGTGGGAAGATCTCAGATTTTGGATTGTCAAGGATTAAGGTGGAGGGTGAATTTGGTGTAGACTTGTTTAGCCAGGATCTTGGCAAGAGCCAGGAGCTATGGAAAAGCCAAGATCTTTCAGGTAATTTAACTGCTGAAACCCCGGCTATTGGTACTCCAGTTGAGAGTGTTAATGAGGTAGATTTTGCTCTAGCTTTGCAAGCCTCTTCTTCATCCAAAAATAGTAGGACATGCTTTAATGTTAAATCTTTAAACTTGAATTCTTTGAATTATAATGCCAATATTGTCAGTGAAAGTGAAAGTAGGAGTACAAATGCAAAGGGTAAGGAAATTTCAACTTTGGATATAGGAGGGGATGATTGGAATACTAAATTTGTTCCTTATGATGATGAGTTTTCTAGCATTGATTATAGTAAGGAGTTGACTGCCAATGCTTCTTCTTTGGTGGATGATGAGAAGGCAAATGGGAAACAATGGGGAAAGGACTGGTGGTGGAGACAGGATGGAAGTGGTGAATTATGTAGTAAAGACTATGTCATGGAGTGGATAGGGAGTCAGATTTGTCCATCAAACCCTGATTGGGATGATGGTAAGAACAATATCCAAGAGAAAGTAGAAATGGAAAATTCAAGTCCAATAGATAAAGACAATGATGCAATTGCACCCCAATCCCAGGTGTTCCGGATAGGACAAACAGATAACGTGGTTGAGGAAAAAGAATCAAGGGGAAAGAAAAATCACAAGAATAAGCACAGGAAGATGCAAGAGTGGTGGAAAGAAGAGCATCTTGCAGAATTAAGCAAGAAGACCACTAAGCTGAAAAATCTTCATGCTAAGTGGAAGAAAGGCTTGAAAGTGCCCCATTTTGATTTGGGTAGAAGGTTTTATCTTTGCAGACGTAAGAAGTTTGGAGAGGAGGATCAGAATGAGTGCGATCAAAATGGGGAGTTTAGCTTCAGAAGAGGCTGGAAGAAGAAAAGTACTCGTTCCATTGGAAGTGACATGTGGAGTGGAGATCTTTTCAGCCGCGAGCTTAGCAGCACAACTAGCATGAGAGGGACACTGTGTTATGTGGCACCAGAATATGGAGGGTGTGGGTTCTTAATGGAGAAGGCTGACATTTATAGTTTTGGTGTTTTGATTCTTGTAATTGTGTCAGGTAGAAGACCATTACATGTTCTTGCATCTCCCATGAAGCTAGAGAAAGCTAACTTAATAAGCTGGTGTAGACACTTGGCTCATGCTGGTGACATTTTAGAACTAGTGGATGAGAGAATGAAAGAAGATTACAACAAGGACCAAGCAAGCTTGTGTATCAACTTGGCCCTCATTTGCTTACAGAAAATTCCGGAGTTACGGCCAGATATTGGGGATATTGTCAAGATTTTGAAGGGTGAGATGGACCTTCCACCTCTTCCATTTGAGTTCTCCCCTTCTCCACCTTCCAGATTATACAGCAGATCAAGAAGGAAACCAAAGGGCACTGCAGAATAA 2139 0.4231 MPSRPFPPASPSLFTKTKVLFLALTISASVVIFCSILYFLYHLWHSLVHRAKTIPFDASAPLKLQRFSYKDLKQATSGFDTANVIGKGGSGTVFRGILKDGKLIAIKRLDALSLQAEREFQNELQILGGLRSPFLVTLLGYCVEKNKRLLVYEYMPNRSLQESLFGEGCLSLSWEMRFWVILDVARALEFLHLGCDPPVIHGDIKPSNVLLDAECRGKISDFGLSRIKVEGEFGVDLFSQDLGKSQELWKSQDLSGNLTAETPAIGTPVESVNEVDFALALQASSSSKNSRTCFNVKSLNLNSLNYNANIVSESESRSTNAKGKEISTLDIGGDDWNTKFVPYDDEFSSIDYSKELTANASSLVDDEKANGKQWGKDWWWRQDGSGELCSKDYVMEWIGSQICPSNPDWDDGKNNIQEKVEMENSSPIDKDNDAIAPQSQVFRIGQTDNVVEEKESRGKKNHKNKHRKMQEWWKEEHLAELSKKTTKLKNLHAKWKKGLKVPHFDLGRRFYLCRRKKFGEEDQNECDQNGEFSFRRGWKKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAHAGDILELVDERMKEDYNKDQASLCINLALICLQKIPELRPDIGDIVKILKGEMDLPPLPFEFSPSPPSRLYSRSRRKPKGTAE* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2645 712 PANTHER OS08G0275200 PROTEIN 1 711 - -
Apr2g2645 712 Gene3D Transferase(Phosphotransferase) domain 1 531 684 - -
Apr2g2645 712 Gene3D Transferase(Phosphotransferase) domain 1 155 266 - -
Apr2g2645 712 SUPERFAMILY Protein kinase-like (PK-like) 59 698 IPR011009 -
Apr2g2645 712 MobiDBLite consensus disorder prediction 688 712 - -
Apr2g2645 712 SMART serkin_6 79 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2645 712 Pfam Protein kinase domain 81 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2645 712 ProSiteProfiles Protein kinase domain profile. 79 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2645 712 PANTHER OS07G0586332 PROTEIN 1 711 IPR044576 -
Apr2g2645 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Apr2g2645 712 Coils Coil 474 494 - -
Apr2g2645 712 MobiDBLite consensus disorder prediction 446 468 - -
Apr2g2645 712 Gene3D Phosphorylase Kinase; domain 1 46 154 - -
Apr2g2645 712 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2645 Apr-Chr2 30236899 30239037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2645 546 678 Receptor kinase-like Gene Family AT3G58690 30.597 3.52e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Apr2g2645 Pkinase 1.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2645 - - ccaj:109812677 1264.6