Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2636 ATGGATTATTCATCATGGATTAACACTTCTTTGGATCTCAACATTAATCCTCACAGGGTTCATGACGATATTCCCAAAAAGGAGGTGGAAAACAATTTTTTCACATTGGGCGTGAAGAAATCTTCTGTAAAAGAAGAGTCCGCTGTTGCCTTGGTGGAGGAGCTGAAACGGGTGAGTACAGAAAACAAGAAGTTGACCGAAATGCTCACAGAGATGTGTGAGAACTACAACGCTTTGCGAAGCAATTTGATGGAATATATGAGGAAGAATCCTGATAAGGAGCTCAGCTCATCTAAGAAAAGGAAGTCTGAAAGCAGCAACAACAATAGTGCTCTAGTTGGAGTCAATGGAAACTCCGAGAGCAGCTCAACTGATGAAGAATCATGCAAGAAACCAAAGGAAGAGACCATCAAGGCAAAAGTTTCAAGAGTTTATGTCAGGACCGAAGCATCTGATACAAGCCTTATTGTGAAAGATGGATATCAGTGGAGGAAATATGGACAAAAGGTGACCAGGGATAACCCTTCTCCAAGAGCATACTTCAAGTGCTCTTTTGCTCCAAGCTGCCCGGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCCGTTTTGGTTGCAACTTATGAAGGAGAGCACAATCATCCCCACCCTACTCAAATGGAGGTAACGACAGGCTCCAACCGTTGTATGACCGTAGGTTCAGTACCCTGTTCTGCATCTCTTAGCTCTTCTGCACCAACAGTTACCCTTGATTGGACCAAATCCAAGTCCACCAGCGAGGCTAAGAATATAAATCCCAAAATTGATTCACCAGAAGTACCGCAGATTTTGGTAGAACAGATGGCTTCTTCCTTGACCAAAGATCCTAATTTCAGAGCAGCACTTCTTGCCGCCATCTCAGGAAAAATGTTGCACAAGGATTAA 927 0.4315 MDYSSWINTSLDLNINPHRVHDDIPKKEVENNFFTLGVKKSSVKEESAVALVEELKRVSTENKKLTEMLTEMCENYNALRSNLMEYMRKNPDKELSSSKKRKSESSNNNSALVGVNGNSESSSTDEESCKKPKEETIKAKVSRVYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPHPTQMEVTTGSNRCMTVGSVPCSASLSSSAPTVTLDWTKSKSTSEAKNINPKIDSPEVPQILVEQMASSLTKDPNFRAALLAAISGKMLHKD* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2636 308 ProSiteProfiles WRKY domain profile. 152 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g2636 308 PANTHER TRANSCRIPTION FACTOR 1 307 - -
Apr2g2636 308 SMART WRKY_cls 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g2636 308 SUPERFAMILY WRKY DNA-binding domain 154 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr2g2636 308 MobiDBLite consensus disorder prediction 102 123 - -
Apr2g2636 308 Gene3D WRKY domain 140 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr2g2636 308 Coils Coil 48 89 - -
Apr2g2636 308 MobiDBLite consensus disorder prediction 91 134 - -
Apr2g2636 308 Pfam WRKY DNA -binding domain 158 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g2636 308 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 307 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2636 Apr-Chr2 30180848 30184572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2636 4 308 WRKY Transcription Factor Family AT1G80840 55.205 1.61e-106 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr2g2636 WRKY 2.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2636 - - gmx:732588 506.138