Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2635 ATGGATCCAGGATCCAAGCCCAACAGGAACATCCTCTTCAACAAGTACGAGATAGGGAAGCTCCTGGGACAGGGCAACTTCGCCAAGGTCTACCACGGAAGAAACCTCAGCACAAACGAAAGCGTGGCCATCAAAGTTATTAAGAAAGAGAGGCTGCAAAAAGAGAGGCTGGTGAAGCAAATAAAGCGCGAGGTGTCTGTGATGCGCCTCGTGCGTCACCCTCACATCGTCCAGCTCAAGGAAGTCATGGCCAACAAGGCCAAGATCTTCATGGTCGTAGAATACGTTAAAGGAGGGGAACTCTTCGCCAAGGTCGCAAAGGGCAAGATGAAGGAAGACGTCGCCAGAAAGTACTTCCAACAACTCATAAGCGCCGTCGATTTCTGCCATAGCCGCGGCGTCACCCACCGTGACTTGAAGCCGGAAAATCTCCTCCTTGACGAGAACGAGGACCTCAAGGTCTCTGACTTTGGCCTCTCTGCCTTGCCGGAGCAGCGGAGATCCGACGGGATGCTCCTCACGCCGTGCGGAACGCCGGCTTACGTGGCGCCGGAGGTGCTGAAGAAGAAAGGATACGACGGGTCGAAGGCTGATATATGGTCGTGCGGTGTTATCCTCTTCGCTTTGCTTTCTGGGTACCTTCCATTTCAAGGTGAGAACGTGATGAGGATCTACAGCAAGTCCTTCAAGGCTGATTATGCTCTTCCCGATTGGATTTCCCCTGGGGCCAAATCCTTGATCTCTAATTTGCTTGTTGTTAATCCCGAAAAGAGGTACTCCATTGCTGATATCATGAAGGACCCATGGTTTCAAATCGGATTCATGAGACCCATTGCGTTTTCAATGAAGGAAACGGCCGTGGAAGATAACATTGATTTCAACGGGGATCCGGCTCGTCCCTCTTACAATGCTTTCGAGATAATATCGTCGCTTTCGCACGGATTTGATCTTAGGAACCTGTTTGAGACGAGAAAGAGGTCTCCGTCGATGTTCATAAGCAAGTTTTCTGCTTCGGCGGTGTTGGCGAAGCTGGAGGCGGTGGCGAAGAAGCTGAATTTTAGGGTGACGGGGAAGAAAGAGTTCATGGTGCGGATGCAGGGGGCGACGGAGGGGAGGAAAGGGAAGCTGGCGATGACGGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTAGAGTTCTCCAAGTCCGCCGGAGACACCCTCGAATACCTTAAGTTCTGCGAGGAGGAAGTGAGGCCTTCTCTGAAAGACATTGTGTGGAGTTGGCAGGGTGACACCAATTGTCACCACTGA 1296 0.5247 MDPGSKPNRNILFNKYEIGKLLGQGNFAKVYHGRNLSTNESVAIKVIKKERLQKERLVKQIKREVSVMRLVRHPHIVQLKEVMANKAKIFMVVEYVKGGELFAKVAKGKMKEDVARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRRSDGMLLTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILFALLSGYLPFQGENVMRIYSKSFKADYALPDWISPGAKSLISNLLVVNPEKRYSIADIMKDPWFQIGFMRPIAFSMKETAVEDNIDFNGDPARPSYNAFEIISSLSHGFDLRNLFETRKRSPSMFISKFSASAVLAKLEAVAKKLNFRVTGKKEFMVRMQGATEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTLEYLKFCEEEVRPSLKDIVWSWQGDTNCHH* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2635 431 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2635 431 Coils Coil 430 431 - -
Apr2g2635 431 Gene3D Transferase(Phosphotransferase) domain 1 8 302 - -
Apr2g2635 431 Pfam Protein kinase domain 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2635 431 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2635 431 Pfam NAF domain 301 356 IPR004041 GO:0007165
Apr2g2635 431 PANTHER - 8 430 - -
Apr2g2635 431 ProSiteProfiles NAF domain profile. 297 322 IPR018451 GO:0007165
Apr2g2635 431 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Apr2g2635 431 Gene3D Kinase associated domain 1, KA1 303 422 - -
Apr2g2635 431 Coils Coil 44 64 - -
Apr2g2635 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Apr2g2635 431 SUPERFAMILY Protein kinase-like (PK-like) 12 271 IPR011009 -
Apr2g2635 431 PANTHER CBL-INTERACTING PROTEIN KINASE 16 8 430 - -
Apr2g2635 431 CDD CIPK_C 303 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2635 Apr-Chr2 30169204 30171697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2635 11 428 CBL-interacting serine-threonine protein kinases AT5G25110 61.163 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr2g2635 Pkinase 3.6e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2635 - - gmx:100804244 765.377