Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2634 ATGGGACCTGGGTTTCTGGTTTCCATTGCATATATAGACCCAGGAAACTTTGAGACAGATCTTCAGTCTGGGGCACAATATAAATATGAGTTACTTTGGATCATATTGGTGGCATCATGTGCTGCTCTTGTAATTCAATCAATGGCAGCCAATCTTGGGGTAGTCACTGGAAAACACTTAGCAGAGCATTGTAGAACTGAATATCCCCGGGTGCCCAACTTCATTCTTTGGATCATTGCTGAAATTGCCATAGTGGCCTGTGACATTCCTGAAGTAATTGGAACAGCCTTTGCATTGAACATGCTCTTCAACATACCTGTGTGGATTGGTGTTCTTCTGACAGGACTCAGCACATTGATCCTCTTAGCATTACAGCAATATGGGGTTAGGAAACTTGAATTCTTGATTGCATTTCTAGTATTTACAATTGCTACATGTTTTATGGTTGAGCTTGGATATGCAAAGCCTGATGCTAAAGAAGTTCTGAAAGGTCTTTTTGTTCCAGAGCTAAAAGGGAGTGGTGCTACTGGTCTTGCAATTTCACTCCTTGGAGCTATGGTTATGCCGCACAATCTCTTTCTGCACTCAGCACTGGTGCTTTCTAGGAAAATACCACGATCAGTGCGGGGAATCAAAGAGGCTTGCAGGTTTTACATGGTAGAGAGTGCCTTTGCTCTCATGGTGGCCTTCCTCATAAATGTTTCTGTTATTTCTGTAAGCGGTGCCGTTTGCAATTCTTCAAATTTGAGTGCAGAAGATCAAATAAGTTGTCAGGATTTGGATCTGAACAAAGCCTCCTTCCTACTTAGAAATGTCTTGGGGAAATGGAGTTCAAAACTGTTTGGAATCGCTTTGCTTGCATCAGGTCAAAGTTCTACTATAACAGGAACCTATGCAGGGCAGTATGTCATGCAGGGATTTCTTGATTTACGACTGACACCATGGATTCGGAATATGTTAACCCGTTGCTTGGCCATAGTTCCTAGTTTGATTGTTGCAGTCATTGGTGGCTCTGCCGGGGCTGGGAAGCTCATAATAATTGCGTCTATGATATTATCATTTGAGCTTCCTTTTGCTTTGGTTCCACTCCTCAAGTTCACAAGCAGCAAAACCAAGATGGGGGCACATGTCAATTCCATTGCGATTTCCTCTGTTACTTGGATAATTGGTACCCTCATTATGGTCATTAATATATACTACTTAATGACTGGCTTCATCAAGCTGCTGCTTCATAGTCATTTAAAAGTTGTGGCCAGAGTGTTTCTTGGGATGTTAGGATTTTCAGGTATGGCAGTATATTTGGCTGGTATAACATATCTAGTGCTTCGCAAAAATAAAGAGGCCACACACCTTTTGGCTCTAACAGCACCAGAAAATCAACAAATGTCAAATGAACAAGGCAATGGATCAATCATTTGTCTTCCAAGAGAAGACATAGTAAGCATGCAATTGCCTCAAAGAAGTAGTCCTGCAGATCTTGACTGA 1485 0.4182 MGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALVIQSMAANLGVVTGKHLAEHCRTEYPRVPNFILWIIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLILLALQQYGVRKLEFLIAFLVFTIATCFMVELGYAKPDAKEVLKGLFVPELKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYMVESAFALMVAFLINVSVISVSGAVCNSSNLSAEDQISCQDLDLNKASFLLRNVLGKWSSKLFGIALLASGQSSTITGTYAGQYVMQGFLDLRLTPWIRNMLTRCLAIVPSLIVAVIGGSAGAGKLIIIASMILSFELPFALVPLLKFTSSKTKMGAHVNSIAISSVTWIIGTLIMVINIYYLMTGFIKLLLHSHLKVVARVFLGMLGFSGMAVYLAGITYLVLRKNKEATHLLALTAPENQQMSNEQGNGSIICLPREDIVSMQLPQRSSPADLD* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2634 494 Pfam Natural resistance-associated macrophage protein 17 379 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr2g2634 494 PRINTS Natural resistance-associated macrophage protein signature 76 102 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr2g2634 494 PRINTS Natural resistance-associated macrophage protein signature 104 123 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr2g2634 494 PRINTS Natural resistance-associated macrophage protein signature 129 150 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr2g2634 494 PRINTS Natural resistance-associated macrophage protein signature 179 202 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr2g2634 494 PRINTS Natural resistance-associated macrophage protein signature 289 308 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr2g2634 494 PRINTS Natural resistance-associated macrophage protein signature 317 334 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr2g2634 494 PRINTS Natural resistance-associated macrophage protein signature 349 368 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr2g2634 494 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 1 373 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr2g2634 494 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 494 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr2g2634 494 Hamap Divalent metal cation transporter MntH [mntH]. 1 405 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr2g2634 494 PANTHER METAL TRANSPORTER NRAMP1 1 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2634 Apr-Chr2 30155799 30161290 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2634 1 487 Inorganic Solute Cotransporters AT1G15960 83.027 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2634 K21398 - gmx:100797298 888.256