Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2626 ATGAGTCTCGAAGACATCAAGAAGGAGGCTGTTGATCTCGAGAGGATTCCGGTTGATGAAGTGTTCAGAGAATTGAACTGCTCCAAGGAAGGTCTCACCAATGAGGAAGGTGAAAAGAGGTTGGCAGTGTTTGGGCCAAACAAGTTGGAAGAAAAGAAGGAAAGCAAGTTTCTCAAATTCCTCGGATTTATGTGGAATCCTCTCTCTTGGGTCATGGAAGCTGCTGCCATCATGGCCATTGCATTGGCCAACGGAGGGGGCGAGCCACCGGATTGGCAAGACTTTGTTGGAATTGTGGCATTGCTGATTATCAACTCAACCATTAGTTTCATAGAAGAAAACAATGCAGGCAACGCTGCTGCAGCACTTATGGCTGGCCTTGCTCCCAAAACCAAGGTTCTGAGAGATGGAAGGTGGACTGAGCAGGAAGCTGCTATACTGGTACCAGGTGATATAGTGAGCATCAAATTAGGAGACATTGTTCCAGCTGATGCTCGTCTATTGCAAGGAGATCCCCTCAAGATTGATCAGTCTGCACTCACCGGTGAGTCTTTGCCTGTTACCAAGCACCCTGGTGATGAAGTCTTCTCTGGCTCCACTGTTAAGCAAGGAGAGATAGAGGCTGTTGTCATTGCCACTGGTGTCCACACCTTCTTTGGTAAGGCTGCTCACTTAGTGGACAGCACTAACCAAGTCGGCCATTTCCAAAAGGTATTGACAGCCATTGGAAACTTCTGCATTTGCTCAATTGCTGTGGGTATGATCATTGAGATTGTGGTCATGTACCCGATTCAGCGTCGCAAGTATAGGAGTGGAATTGACAATCTCTTGGTGCTTCTCATTGGAGGGATTCCTATTGCCATGCCAACAGTGTTGTCAGTGACAATGGCTATTGGTTCTCATAGGCTATCCGAGCAAGGTGCTATCACCAAGAGGATGACAGCCATTGAGGAAATGGCCGGAATGGATGTTCTATGCAGTGACAAGACCGGCACTTTAACACTGAACAAGCTTACTGTGGATAAGAGTTTGATTGAGGTTTTTTCAAGAGATACTGACAAGGATACGGTCATCTTGCTTGGTGCAAGGGCCTCCAGGGTTGAGAACCAAGACGCTATTGATGCTTGCATTGTTGGAATGTTGGGTGATCCAAAAGAGGCAAGGGATGGCATCACTGAGGTTCATTTCCTTCCTTTCAATCCAGTGGACAAACGTACGGCCATAACATACATAGATGCTAATGGCAATTGGCACAGAGTGAGCAAAGGAGCACCAGAGCAGATTATCGAGCTTTGCAATCTTCGGGAAGACGTGAAGAAGAAGGCTCATTCCATCATTGACAAATTTGCTGATCGCGGTCTTCGTTCCCTTGCTGTTTCCAAACAAGAAGTGCCAGAAAAGACCAAGGAAAGTGCTGGAGGACCATGGCAATTTGTGGGTCTGTTGCCACTGTTTGATCCACCAAGGCATGACAGTGCAGAGACCATAAGGCGTGCTCTCCATCTTGGAGTGAACGTTAAGATGATAACTGGTGATCAACTGGCTATTGGGAAAGAAACAGGTCGCAGGCTTGGCATGGGATGCAACATGTATCCTTCATCCTCTCTCCTTGGTGAACACAAAGATGAATCCATTGCTGGCCTTCCAATTGATGAGCTCATTGAGAAAGCTGATGGATTTGCTGGGGTCTTCCCTGAACATAAGTACGAGATTGTGAAGAGACTTCAAGACAGGAAACACATATGTGGGATGACAGGAGATGGTGTGAACGATGCTCCTGCACTCAAAAGAGCAGACATTGGAATTGCTGTGGCTGACGCAACTGATGCAGCACGAAGTGCATCTGACATAGTGCTGACAGAGCCTGGTTTGAGTGTGATTGTGAGTGCGGTGTTGACAAGCAGGGCCATTTTCCAGAGAATGAAGAACTACACCATCTATGCTGTTTCTATAACAATCCGAATTGTGTTGGGATTCATGCTCATTGCTCTCATCTGGAAGTTTGATTTCTCACCCTTTATGGTTTTGATCATTGCGGTGCTGAATGATGGGACAATCATGACCATTTCCAAGGACAGGGTGAAGCCATCTCCAGTTCCAGATTCGTGGAAGCTGAGAGAGATTTTTGCCACTGGCGTTGTGCTTGGTGCCTACCTCGCTGTTATGACTGTTGTCTTCTTCTGGGCTGCTCATGCATCTAATTTCTTCTCTGATAAATTCGGCGTGAGATCAATCAGGGACAATCACCACGAGCTTACAGCAGCTGTTTACCTTCAAGTGAGTATTGTGAGTCAGGCTCTTATCTTTGTTACACGGTCAAGGAGCTGGTCTTATATTGAACGTCCTGGCATTTTGCTTGTTGTCGCCTTTCTCATAGCACAGCTGATTGCCACGATCATAGCTGTGTATGCAAACTGGAGCTTTGCAAAAATCAAAGGCATTGGATGGGGTTGGGCTGGTGTTATTTGGCTCTACAGCATCGTTTTCTATGTCCCCTTGGATATCCTTAAGTTTATCATCCGATATGCATTGAGTGGCAAGGCATGGAACAACATAACTGACAACAGGATTGCTTTCACCTCAAAGACAGATTATGGAAAGGGAGAGAGAGAAGCACAGTGGGCTGCAGCTCAACGCACATTGCATGGCCTCAATCCTCCGGAAACTGAACAAATCTTGAATGAAAAGAACAACTACAGGGAACTATCCGAACTTGCAGAACAGGCCAGGAAACGTGCTGAAGTTGCAAGGTTAAGGGAGCTTCACACACTTAAGGGGCATGTCGAGTCTGTGGTAAAACTCAAGGGACTTGACATTGAGACAATTCAGCAGCACTACACCGTTTGA 2847 0.4654 MSLEDIKKEAVDLERIPVDEVFRELNCSKEGLTNEEGEKRLAVFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGEPPDWQDFVGIVALLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWTEQEAAILVPGDIVSIKLGDIVPADARLLQGDPLKIDQSALTGESLPVTKHPGDEVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMIIEIVVMYPIQRRKYRSGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFSRDTDKDTVILLGARASRVENQDAIDACIVGMLGDPKEARDGITEVHFLPFNPVDKRTAITYIDANGNWHRVSKGAPEQIIELCNLREDVKKKAHSIIDKFADRGLRSLAVSKQEVPEKTKESAGGPWQFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGCNMYPSSSLLGEHKDESIAGLPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAVLNDGTIMTISKDRVKPSPVPDSWKLREIFATGVVLGAYLAVMTVVFFWAAHASNFFSDKFGVRSIRDNHHELTAAVYLQVSIVSQALIFVTRSRSWSYIERPGILLVVAFLIAQLIATIIAVYANWSFAKIKGIGWGWAGVIWLYSIVFYVPLDILKFIIRYALSGKAWNNITDNRIAFTSKTDYGKGEREAQWAAAQRTLHGLNPPETEQILNEKNNYRELSELAEQARKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2626 948 Gene3D - 91 812 - -
Apr2g2626 948 Gene3D - 338 485 IPR023299 GO:0000166
Apr2g2626 948 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 98 357 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g2626 948 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 560 673 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g2626 948 Gene3D - 323 622 IPR023214 -
Apr2g2626 948 SUPERFAMILY Calcium ATPase, transmembrane domain M 12 844 IPR023298 -
Apr2g2626 948 Gene3D - 897 948 - -
Apr2g2626 948 SFLD p-type atpase 308 637 IPR044492 -
Apr2g2626 948 Pfam E1-E2 ATPase 128 305 - -
Apr2g2626 948 Pfam Cation transporter/ATPase, N-terminus 16 78 IPR004014 -
Apr2g2626 948 PRINTS H+-transporting ATPase (proton pump) signature 442 460 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g2626 948 PRINTS H+-transporting ATPase (proton pump) signature 557 573 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g2626 948 PRINTS H+-transporting ATPase (proton pump) signature 585 601 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g2626 948 PRINTS H+-transporting ATPase (proton pump) signature 616 641 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g2626 948 PRINTS H+-transporting ATPase (proton pump) signature 757 778 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g2626 948 SUPERFAMILY Calcium ATPase, transduction domain A 129 226 IPR008250 -
Apr2g2626 948 Pfam haloacid dehalogenase-like hydrolase 322 599 - -
Apr2g2626 948 PANTHER CALCIUM-TRANSPORTING ATPASE 2 927 - -
Apr2g2626 948 PANTHER ATPASE 9, PLASMA MEMBRANE-TYPE 2 927 - -
Apr2g2626 948 SUPERFAMILY HAD-like 322 632 IPR036412 -
Apr2g2626 948 SFLD C1.7: P-type atpase like 308 637 - -
Apr2g2626 948 CDD P-type_ATPase_H 31 838 IPR006534 GO:0008553|GO:0016021|GO:0120029
Apr2g2626 948 PRINTS P-type cation-transporting ATPase superfamily signature 176 190 - -
Apr2g2626 948 PRINTS P-type cation-transporting ATPase superfamily signature 326 340 - -
Apr2g2626 948 PRINTS P-type cation-transporting ATPase superfamily signature 480 491 - -
Apr2g2626 948 PRINTS P-type cation-transporting ATPase superfamily signature 502 512 - -
Apr2g2626 948 PRINTS P-type cation-transporting ATPase superfamily signature 585 604 - -
Apr2g2626 948 PRINTS P-type cation-transporting ATPase superfamily signature 608 620 - -
Apr2g2626 948 ProSitePatterns E1-E2 ATPases phosphorylation site. 328 334 IPR018303 -
Apr2g2626 948 Coils Coil 892 919 - -
Apr2g2626 948 Gene3D - 129 213 - -
Apr2g2626 948 SMART Cation_ATPase_N_a_2 12 84 IPR004014 -
Apr2g2626 948 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 31 803 IPR006534 GO:0008553|GO:0016021|GO:0120029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2626 Apr-Chr2 30108216 30118878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2626 1 948 Primary Pumps ATPases AT2G07560 83.755 0.0 1628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2626 K01535 - gmx:100796240 1704.49