Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2619 ATGGTGGAGAACCCGTGGGGGAATTGGTCTTCCGATGGGGAAATGGATGATGAGGCAAATAAACGTTTGTGCCACACCAACCCTTTTGATGAAGAGTTCCTCAGAGATATCTTGCAGCAACCACAGCATGCAATTGTTAGCACTACTCCCATCCTTGATAGTGGAACTTCATTATTTGGGCAAACAAGTATGGCAACCTCATCTCCAACAAGTTTTATACTGTCTTTCGACAAATCCGCTACATTGTTACCAAATGATCATGATTCTTCTTATCCTTTGAAAGAGGTTTCCGAATCCCAACTGGGAAATCGCTCCAAGGACACTTTGCCCTTGTCCTCATCAAAGACCAACCAAGGAATGAAGAAGACTCGAAGCGCTTCCGAGTCACTAGATCACATAATGTCTGAGAGAAATCGGAGACAGGAACTCACTAGGAAGTTCATAGCACTTTCAGCCACCATCCCTGGCCTTAAGAAGATGGACAAGGCCCACGTACTAAGAGAAGCAATAAATTATGTGAAACAACTTCAAGAACGTGTAAAAGAGCTAGAAGAAGATGTGCAGAAGAACGGTGTAGAATCAGTGATAACAATAACGAGATCTCATCTCTGCATCGATGATGAAATGAACACTGACGAATGCAATGGGCACAATGAAGGATTTCCTGAAGTTGAAGCCAGAATCTTAGGGAAGGAAGTGTTAATCAAAATTCACTGTGGAAAACAAAAGGGCATTCTGATCAAACTAATGTCCCAGCTTGAACGTCTTCATCTCAACATATCAACTAGCAATGTCTTGCCATTTGGTAACACTCTTGACATCACCATTATTGCTCAGATGGGTGACAAATACAACTTGGTAGTGAAGGATCTAGTGAAAGAGTTGAGACAAGTAGCTATGTTGAAGTTATGCGATGTGCAACAATGA 927 0.4207 MVENPWGNWSSDGEMDDEANKRLCHTNPFDEEFLRDILQQPQHAIVSTTPILDSGTSLFGQTSMATSSPTSFILSFDKSATLLPNDHDSSYPLKEVSESQLGNRSKDTLPLSSSKTNQGMKKTRSASESLDHIMSERNRRQELTRKFIALSATIPGLKKMDKAHVLREAINYVKQLQERVKELEEDVQKNGVESVITITRSHLCIDDEMNTDECNGHNEGFPEVEARILGKEVLIKIHCGKQKGILIKLMSQLERLHLNISTSNVLPFGNTLDITIIAQMGDKYNLVVKDLVKELRQVAMLKLCDVQQ* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2619 308 MobiDBLite consensus disorder prediction 87 132 - -
Apr2g2619 308 Gene3D - 117 191 IPR036638 GO:0046983
Apr2g2619 308 PANTHER BHLH TRANSCRIPTION FACTOR 22 306 - -
Apr2g2619 308 SMART finulus 133 182 IPR011598 GO:0046983
Apr2g2619 308 Pfam Helix-loop-helix DNA-binding domain 132 177 IPR011598 GO:0046983
Apr2g2619 308 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 22 306 - -
Apr2g2619 308 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 127 176 IPR011598 GO:0046983
Apr2g2619 308 Coils Coil 166 193 - -
Apr2g2619 308 MobiDBLite consensus disorder prediction 94 124 - -
Apr2g2619 308 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 132 193 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2619 Apr-Chr2 30071302 30074869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2619 69 295 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 44.068 8.92e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr2g2619 HLH 7.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2619 - - aprc:113854852 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2619 2 30071302 30074869 Apr2g2619 2 30071302 30074869 PCT