Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2605 ATGGGTGCAACGTTGCTGCCGGAGCTTGGGACGGAGATAGTGGTGCCGGTGTGCGCTGTGGTTGGTATTGTATTCTCGTTGGTGCAGTGGTACCTAGTGTCGCGCGTCAAGCTCACGCCTGAGCGCCACGGACCCTCGTCGTCCCCGGGCAACAACGACAACAACAACAAGAACGGATACGGTGACTACCTGATTGAGGAAGAAGAAGGCATCAACGACCATAACGTCGTCATAAAATGCGCTGAGATACAGAGCGCCATATCTGAAGGTGCAACGTCCTTTCTTTTCACTGAATATCAATATGTGGGGATTTTTATGGCTGCTTTTGCAATTTTAATCTTCCTTTTCCTGGGCTCAGTGGAGAGCTTTAGTACCAAGAGCCAGCCCTGCACATATGATAAGCAGAAGCTATGTAAACCTGCTCTTGCAACTGCACTCTTCAGCACTGTATCATTCTTGCTTGGTGCTTTAACTTCAGTCCTATCTGGTTACCTTGGGATGAAAATTGCTACCTATGCCAATGCAAGGACGACCTTGGAAGCTAGGAAGGGAGTTGGAAAGGCATTTATTACCGCATTTAGATCTGGTGCTGTTATGGGTTTCCTTCTTGCAGCTAATGGTCTTTTGGTGCTCTACATTGCCATCAATCTCTTCAAGATATATTATGTTGATGACTGGGAAGGCCTTTTTGAGGCTATAACTGGTTATGGTTTGGGTGGATCTTCCATGGCTCTGTTTGGGAGAGTTGGTGGTGGCATCTATACCAAAGCTGCTGATGTTGGTGCTGACCTGGTAGGAAAAGTTGAAAGAAATATCCCAGAGGATGATCCAAGGAACCCAGCTGTCATTGCTGACAATGTTGGTGATAATGTTGGAGATATTGCTGGGATGGGTTCTGATCTTTTTGGTTCATATGCTGAATCATCCTGTGCTGCCCTAGTTGTGGCTTCAATTTCCTCATTTGGAATCAACCATGATTTCACTGCCATGTTGTATCCCTTACTTGTCAGTTCTATGGGCATTCTTGTCTGTTTGATCACTGCTCTCTTTGCAACTGATTTCTTTGAGATCAAGGCTGTCAAGGAAATTGAACCAGCATTAAAGAAACAGCTTATCATCTCAACTGTTCTCATGACTGTTGGAGTTGCAATTATTAGTTGGATTGCTCTTCCATCATCCTTCACAATTTTCAACTTTGGTGCTCAGAAAGAAGTGAAGAGCTGGCAGCTGTTCCTATGTGTGGGTGTCGGTCTCTGGGCTGGACTTATTATTGGGTTTGTGACTGAATATTATACAAGCAATGCTTACAGCCCTGTACAAGATGTTGCTGATTCTTGCCGGACTGGAGCTGCAACCAATGTCATCTTTGGCCTTGCTCTGGGATACAAGTCTGTTATTATTCCTATTTTTGCCATTGCTATCAGCATTTTTGTGAGTTTCAGTTTTGCAGCAATGTATGGTATTGCTGTGGCTGCTCTGGGGATGCTGAGCACCATTGCTACTGGGTTGGCTATAGATGCTTATGGGCCTATTAGTGACAATGCTGGGGGTATTGCTGAGATGGCAGGCATGAGCCATCGAATCCGTGAAAGAACTGATGCCCTTGATGCTGCTGGCAACACTACAGCTGCCATCGGCAAGGGATTTGCTATCGGATCTGCTGCTCTAGTGTCTTTGGCCTTGTTTGGTGCCTTTGTCAGCCGGGCTGGAATTTCAACAGTGGATGTCTTGACACCCAAGGTCTTCATTGGACTCATAGTTGGTGCCATGCTTCCTTACTGGTTTTCTGCCATGACGATGAAGAGTGTGGGAAGTGCTGCTTTAAAGATGGTTGAGGAGGTTCGTAGGCAGTTCAACACCATTCCAGGACTCATGGAGGGTCATGCCAAGCCTGATTATGCTACCTGTGTCAAGATTTCTACTGATGCATCAATTAAGGAGATGATTCCTCCAGGAGCCCTTGTCATGCTTACACCACTCATCGTTGGTATCTTTTTTGGCGTAGAAACTCTTTCAGGCGTTCTTGCCGGCTCTCTAGTTTCTGGGGTGCAGATCGCAATATCAGCATCCAACACCGGTGGTGCCTGGGATAATGCTAAGAAGTACATCGAGGCCGGCGCTTCTGAGCATGCCCGGGCATTGGGTCCAAAAGGATCTGAACCACATAAAGCAGCTGTTATTGGTGACACCATTGGAGACCCTCTTAAGGATACTTCGGGCCCTTCGCTCAACATCCTTATTAAGCTTATGGCAGTTGAGTCGCTTGTTTTCGCTCCATTTTTCGCTACCCATGGCGGTTTGCTTTTTAAGATCTTTTAA 2319 0.464 MGATLLPELGTEIVVPVCAVVGIVFSLVQWYLVSRVKLTPERHGPSSSPGNNDNNNKNGYGDYLIEEEEGINDHNVVIKCAEIQSAISEGATSFLFTEYQYVGIFMAAFAILIFLFLGSVESFSTKSQPCTYDKQKLCKPALATALFSTVSFLLGALTSVLSGYLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYVDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDFTAMLYPLLVSSMGILVCLITALFATDFFEIKAVKEIEPALKKQLIISTVLMTVGVAIISWIALPSSFTIFNFGAQKEVKSWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGHAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARALGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2605 772 Pfam Inorganic H+ pyrophosphatase 43 757 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Apr2g2605 772 MobiDBLite consensus disorder prediction 44 59 - -
Apr2g2605 772 PIRSF H+-PPtase 10 770 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Apr2g2605 772 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 762 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Apr2g2605 772 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 11 767 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Apr2g2605 772 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 772 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Apr2g2605 772 MobiDBLite consensus disorder prediction 40 59 - -
Apr2g2605 772 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 1 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2605 Apr-Chr2 29986236 29991695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2605 5 635 Primary Pumps ATPases AT1G15690 88.906 0.0 1130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2605 K23025 - gmx:100803691 1402.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2605 2 29986236 29991695 Apr2g2605 2 29986236 29991695 ECH