Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2589 ATGGGCTTGTTCAAAAGTGGAACCTTGTTTTTCTATTTTCTCCTTTGGTTTAGAACATGCCTAGCCAATGACCAACACATTGGTCAGATATATCCTGGCTTCAGTGCTTCTCGGGTGGATTGGCAAGACCATGGTGGGTTTTTCTTGCTATCTAACAGCTCAGCTTTCGCTTTTGGATTCTTTACTACGTTGGATGTTTCACTGTTTGTTTTGGTTGTCATTCACTTAAGTAGCTACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTCGTTAGAAATTCTGATAAATTTGTGTTTGACCGTAGTGGGAATGCATATTTGGAAGGTGGGAATGGTGTAGTTTGGGCAACAAATACAACAGGACAAAGAGTGAGAGCCATGGAGTTGATGGACTCCGGGAATTTGGTGTTGCTTGGGGAAAATGGGACACTTATTTGGCAGAGTTTTAGCCATCCCACTGATACTCTTTTGCCCGGTCAAGCGTTTGTTGAAGGAATGAGACTCAAGAGCTTCCCTAACCGCATGAACTTGTTTCATTATCTTAGTTACTTAGAAGGTGATTTGGTTCTCTATGCTGGATTTGAAACTCCACAAGTGTATTGGTCCTTATCAGGGGAAGCCCAGAGAAGTCCAAAAAATGACACTGGTAAGGTTCACTCTGCATCACTGGTGTCCAATTCATGGAAATTTTATGACAAAAATGGAGCTTTGCTATGGAAAACTGTCTTCTCTGATCATTCAGATAATAAGACATTGTGGGCTGCTATTTTGGACCCAAATGGTGCAATCTCTTTCTATGACCTTAACAAAGGGAAGTCTCCTAACCCTGAGGCAATTAAAGTACCACAAGACCCTTGTGGCATTCCTGAGCCTTGTGATCCTTATTATGTTTGCTTCTTTGAAAACTGGTGTGAATGCCCTGCGCTTCTCAAATCTCGTTTCAATTGCAAACCTCCAAACATCTCAACATGTTCTAGGAGTTCAACAGATCTTGTGTATGTTGGTGAAGAGCTTGATTATTTTGCTCTCAAGTATGTTGCACCAGTTTCAAAATCAACCCTGAGTGCTTGCAAAGAGGCTTGTTTGGGAAACTGCTCATGCCTTGTGCTTTTCTTTGAGAACAGTACTGGTAGATGCTTTCATTTTGATCAGACTGGGAGTTTCCAACGCTACAAGGGGAGCACTGGTGGTTATGTTTCATACTTGAAGATCTCGACTGATGATAATGGAAATGGTAACAAAAATGGAAGGAATAACATGATGCTAATTGTTGTCATAGTAGTTCTCACAGTTCTGGTTATAGTTGGTCTTATAACAGGATTCTGCTATTACAACAGAAAGAAGAAATTTGAGAAGTATCCTGAAGACGCCTTGGAGGAAGATGATTTCTTAGACAGTCTCTCTGGTGTGCCTGCTCGGTTTACTTTTAATGCACTGTGTAGAGCAACTAAGGATTTCTCCACAAAAATTGGGGAAGGAGGTTTTGGCTCAGTGTATCTAGGTGTGCTTGAAGATGGCACCCAATTGGCTGTGAAAAAATTGGAAGGTGTTGGACAAGGGGCAAAAGAGTTTAAGGCTGAAGTGTCCATAATTGGAAGCATTCATCATGTTCATCTTGTCAAGTTGAAAGGGTTCTGTGCTGAGGGTCCTCATCGCCTTCTTGTCTATGAATACATGGCAAGGGGTTCTTTGGACAAATGGATCTTCAAGAACAGTGAAAACACTTTCTTATTAAACTGGGACACAAGGTACAACATTGCAATAGGCACAGCAAAGGGACTGGCCTATCTTCATGAGGAGTGTGAAGTGAGGATTATCCACTGTGATATCAAACCACAAAATGTTCTTCTTGATGACAATTTCACAGCCAAAGTTTCAGATTTTGGATTGGCTAAGCTAATGAGCCGAGAGCAAAGCCATGTGTTCACAACTCTAAGGGGAACAAGGGGATATCTTGCACCAGAATGGATCACTAACTATGCAATCTCAGAAAAGAGTGATGTGTTCAGCTATGGCATGGTGTTGCTTGAGATAATTGGAGGAAGAAAGAACTATGATCAGTGGGAAGGCTCAGAGAAAGCACATTTTCCATCTTATGTATTCAGAATGATGGAGGAAGGAAAACTGAAAGAGGTTCTTGACCAAAAGATAGATATTGATGATAAGGATGAAAGAGCTGAGACTGCCCTTAAAGTTGCTCTTTGGTGCATACAAGATGATGTGAATTTGAGGCCTTCCATGACTAAGGTGGCTCAGATGCTTGAAGGTTTGTGCCCTGTACCTGATCCCCCTTCATTATCTCAGTCCGGTACTTATTCAGCTTTCATGAAAATGAGTAGTGGTGAAGCTACTTCGTCAGATTTTTATAGTAATGTACCCTTGTCGTGTGTTCAGTTATCAGGACCAAGATGA 2412 0.4154 MGLFKSGTLFFYFLLWFRTCLANDQHIGQIYPGFSASRVDWQDHGGFFLLSNSSAFAFGFFTTLDVSLFVLVVIHLSSYKVVWTANRGLLVRNSDKFVFDRSGNAYLEGGNGVVWATNTTGQRVRAMELMDSGNLVLLGENGTLIWQSFSHPTDTLLPGQAFVEGMRLKSFPNRMNLFHYLSYLEGDLVLYAGFETPQVYWSLSGEAQRSPKNDTGKVHSASLVSNSWKFYDKNGALLWKTVFSDHSDNKTLWAAILDPNGAISFYDLNKGKSPNPEAIKVPQDPCGIPEPCDPYYVCFFENWCECPALLKSRFNCKPPNISTCSRSSTDLVYVGEELDYFALKYVAPVSKSTLSACKEACLGNCSCLVLFFENSTGRCFHFDQTGSFQRYKGSTGGYVSYLKISTDDNGNGNKNGRNNMMLIVVIVVLTVLVIVGLITGFCYYNRKKKFEKYPEDALEEDDFLDSLSGVPARFTFNALCRATKDFSTKIGEGGFGSVYLGVLEDGTQLAVKKLEGVGQGAKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLDKWIFKNSENTFLLNWDTRYNIAIGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFTAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVFSYGMVLLEIIGGRKNYDQWEGSEKAHFPSYVFRMMEEGKLKEVLDQKIDIDDKDERAETALKVALWCIQDDVNLRPSMTKVAQMLEGLCPVPDPPSLSQSGTYSAFMKMSSGEATSSDFYSNVPLSCVQLSGPR* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2589 803 SMART serkin_6 484 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2589 803 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 203 IPR036426 -
Apr2g2589 803 ProSiteProfiles Protein kinase domain profile. 484 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2589 803 CDD PAN_AP_plant 349 405 - -
Apr2g2589 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Apr2g2589 803 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 803 - -
Apr2g2589 803 Gene3D Transferase(Phosphotransferase) domain 1 559 757 - -
Apr2g2589 803 SMART blect_4 40 152 IPR001480 -
Apr2g2589 803 ProSiteProfiles PAN/Apple domain profile. 324 406 IPR003609 -
Apr2g2589 803 Pfam D-mannose binding lectin 81 162 IPR001480 -
Apr2g2589 803 PIRSF SRK 4 800 IPR024171 GO:0004674
Apr2g2589 803 Gene3D - 44 151 IPR036426 -
Apr2g2589 803 ProSiteProfiles Bulb-type lectin domain profile. 34 150 IPR001480 -
Apr2g2589 803 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 2 803 - -
Apr2g2589 803 SUPERFAMILY Protein kinase-like (PK-like) 468 755 IPR011009 -
Apr2g2589 803 Pfam Protein kinase domain 487 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2589 803 Gene3D Phosphorylase Kinase; domain 1 454 558 - -
Apr2g2589 803 CDD B_lectin 45 152 IPR001480 -
Apr2g2589 803 CDD STKc_IRAK 490 757 - -
Apr2g2589 803 ProSitePatterns Protein kinases ATP-binding region signature. 490 513 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2589 Apr-Chr2 29896349 29899690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2589 422 764 Receptor kinase-like Gene Family AT5G20050 44.384 9.40e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr2g2589 Pkinase 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2589 - - gmx:100816004 1381.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2589 2 29896349 29899690 Apr2g2589 2 29896349 29899690 ECH