Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2547 ATGGAAACTAGTAACCTGAATAATGTTACTAACAGCTTACGAGTAAGTAGTTCTTCAATTTGGAGAAACAATACGATGGACGTTTTCTCTAGGTCCGCTCATGAAGTAGATGATGAAGAAGCTCTAAAATGGGCGGCACTTGAAAAACTCCCTACTTACAATCGTTTAAAGAAAGGCTTGTTAACTACATCCAGTGGTGAGGTCAATGAAATTGATGTCACTGATATTGGAACAAAGGCAAGAAAGAAAGTGTTGGAGAGGTTGGTACGAGATGCTGAAGAGGACAATGAGAAGTTTCTGTTGAAGCTAAGGGAAAGAATAGATAGAGTTGGTATTTGTATTCCAACAATTGAAGCCAGATTTGAGCATCTAAATGTTGAGGCAGAAGCTTATGTTGGCAGCAGAGCCTTACCCACGTTTTTTAACTTCATTGTTAATACATTAGAGAATTGTTTGAATTATCTGCATATTCTTTCAAGCAAAAAGAAGCATGTGACTATTCTTAAAGATGTTAGTGGAATAGTAAAACCTTGTAGGATGACATTGCTTTTGGGTCCTCCAAGTTCTGGAAAAACAACACTACTTTTGGCTCTGGCAGGAAAACTTGATCCAAATCTTAAGGTTTCTGGGGGAGTGACTTATAATGGGCATGGAATGAATGAATTTGTACCTCAGAGAACTGCTGCCTATATTGGCCAACATGATGTTCATATTGGAGAAATGACTGTAAGGGAAACCTTGGCTTTCTCTGCAAGGTGCCAAGGGGTTGGATCACGTTATGACTTGCTATCTGAACTGTCAAGAAGAGAAATAGCAGCAAATATTAAGCCTGACCCGTATATTGACATCTACATGAAGGCAACAGCATCTGAAGGCCAGGAAGCAAACCAGATGATGACAGAATATATACTTAAGATCTTGGGGCTGGAAATATGTGCTGATACTGTGGTAGGGGATGAAATGTTGCGTGGTATATCTGGTGGACAAAGGAAGCGTGTTACCACAGGGGAGATGTTGGTTGGTCCAACAAATGCACTGTTCATGGATGAAATATCAACTGGCTTGGACAGCTCCACAACTGTTCAAATTATGAAATGTCTTAGACAAATTGTTCACATTCTAAATGGAACAGCAGTTATCTCACTATTGCAACCAGAGCCAGAGACATATGAGCTTTTTGATGACATTATTCTCCTCTCTGATGGCCAAATAGTATACCATGGACCTCGTCAGCTCGTCCTTCAGTTTTTTGAATCTATGGGTTTCAGATGTCCTGAGAGAAAAGGTGTTGCGGACTTCCTTCAAGAAGTAACTTCAAGGAAGGATCAAGAACAGTACTGGGTACACAAAGATGAGCCATACAGTTTTGTTAGAGTTAATGAATTTGCTGTGGCATTTCAACGCTTCCATGTGGGTAGGGAAATTGGAGATGAGCTATCAGTTCCATTTGATAGGACAAAGAACCACCCAGCTGCATTAACTACTAAGAAGTATGGGGTAAACAAGAAGGAGCTTTTGAAAGCTAACTTCTCAAGAGAGTATCTGCTTATGAAGAGGAATGCATTTGTTTACATCTTCAAGCTATCACAACTGGCAGTGATGGCAGTGGTAGCAATGACAGTATTCATGCGAACTGAGATGCATAGAGATTCTGTGGATAATGGGGGAGTTTACAGTGGTGCACTTTTTTTCACTATAGTAATGGTCTTGTTTAATGGGATGCCTGATATTTCCATGACTGTAGCAAAACTTCCTATTTTTTACAAGCAAAGGGACCTCCTATTCTACCCTGCATGGGCATATGCTATCCCCAGCTGGATCCTTAAGATTCCTGTTACATTGACTGAAGTTGTGGTCTGGGTATCTATCACCTACTATGTAATTGGATTTGACCCCAATGTTGGCAGGTTTTTCAAACAGTATTTTTTGTTATTACTACTTGGCCAGATGGCTTCTGCGTTGTTTCGTTCAATTGCTGCAGTGGGTAGGAATATGATTATTGCTAACACATTTGGATCATTTGCAATAGTCACACTTCTTACATTGGGTGGCTTCATATTGTCAAGAGAGGATGTTAAGAAATGGTGGATTTGGGGTTACTGGATTTCACCAATTATGTATGAGCAGAATGCTATGATGGTCAATGAGTTCCTTGGTCAGAGTTGGAATCATGTTCTTCCAAATTCAACCGAGCCATTGGGAGTTGAGGTTCTGAAGTCTCGTGGTTTCTTCACCCATGCATTCTGGTATTGGATAGGGGTTGGAGCATTGTTTGGGTTTGTTTTTCTGTTGAACATCACATTCACTTTGGCTCTCACTTATCTCAACCCACTAGAGAAGCCACAAGCTGTCTTAGATGACAATGGAACAGAAAGTATGTCTTCCAGCTCTGCATCAGTGAGGCCAGAGGCTGATGTTGAGTCCAGCCACAGGAGGAAAAGGGGAATGATTCTTCCATTTGAGCCACATTCTCTTACCTTTGATGAAATCACATACTCGGTAGACATGCCAGAGGAAATGAAGAATAGAGGTGTAATTGAGGACAGATTGGTCCTTCTGAAGGGAGTTAGTGGAGTATTTAGGCCAGGCGTTCTCACAGCTCTGATGGGTGTAAGTGGAGCAGGTAAAACAACTTTGATGGATGTGTTGGCTGGAAGGAAAACTGGAGGGTACACTGAGGGGAGGATCACAATTTCAGGGTACCCTAAAAGGCAAGAAACATATGCTCGAATCTCTGGCTACTGTGAGCAGAATGATATCCACTCTCCTCATGTTACAGTCTATGAATCCTTACTTTACTCAGCATGGCTTCGTTTATCACCTGAAGTCAATTCTGAAACCAGAATGATGTTCATTGAGGAAGTGATGGAGCTGGTAGAGTTGAACGTGTTGAGGCAAGCTTTAGTTGGTTTGCCTGGTGTGAGTGGTCTCTCTACTGAACAGCGCAAGAGGCTAACTATAGCAGTTGAGCTAGTGGCTAACCCTTCCATAATATTCATGGATGAGCCAACTTCCGGTCTAGATGCTAGAGCTGCTGCAATTGTTATGAGAACAGTTAGAAATACAGTGGACACAGGAAGAACAGTTATTTGTACAATCCATCAACCAAGCATTGACATATTTGAAGCTTTTGATGAGCTTTTCCTACTGAAGCGAGGAGGACAAGAAATATATGTTGGCCCATTGGGTCGTCATTCGAACCACCTCATAGAGTATTTTGAGAGGATTGAAGGGGTTAGTAAAATCAAAGATGGACATAACCCTGCAACATGGATGTTGGAAATTACAACTTCGGCACGAGAAATGGATTTGAATGTTGACTTTGCTGATATATACAGAAATTCAGAACTACATAGGAGGAATAAAGCACTTATAGCTGAATTGAGCAAACCTGCTCCTGGTTTCAAGGAACTCAATTTTCCTACTCAATATGCACAGCCATTTCTCATCCAATGCATGGCCTGCCTATGGAAACAACATTGGTCATACTGGCGCAATCCTCCATATACTGCAGTGAGATTTTTGTTCACTACATTTGTAGCTTTGATGTTTGGAACAATGTTCTGGGACCTTGGATCCAAAACACGACGGAAACAAGATCTGTTTAATGCCATCGGTTCCATGTACAATGCCATTCTCTTCCTTGGGACCCAGAATGCCTCTTCTGTGCAGCCAGTGGTGGCCATTGAAAGAACAGTATTTTATAGAGAAAGAGCAGCTGGAATGTATTCAGCCATTCCCTATGCAATTGCGCAGGTTGCAATAGAGCTACCATATATTCTTGCTCAAGCTGTTACATATGGCCTCATAGTTTATGCAATGATCGGATTTGAATGGACTGCATCCAAATTCTTTTGGTATCTATTCTTCATGTACTTCACATTTCTATACTTCACCTTTTATGGCATGATGACTGTGGCTGTAACACCAAACCAACATGTTGCTTCAATTGTGGCCACTGCATTCTATGGAATTTGGAATCTTTTTTCTGGATTTATTGTCCCAAGACCTAGTATTCCTGTGTGGTGGAGATGGTACTATTGGGCATGTCCTGTGGCTTGGACCTTGTATGGATTGGCTGCATCGCAGTTTGGTGATGTAACAAGTACAATTGAGTTTAATGAGACAGTTAAAGAGTTTCTAAGGAGGTACTTCGGTTATAGAGATGATTTTGTAGGAGTTGCTGCATGTGTAGTTGTTGGGTTTGCAGTTCTATTTGCTATTATCTTTGCTATATCTGTAAAGGTCTTCAATTTCCAAAGGCGATAG 4269 0.4118 METSNLNNVTNSLRVSSSSIWRNNTMDVFSRSAHEVDDEEALKWAALEKLPTYNRLKKGLLTTSSGEVNEIDVTDIGTKARKKVLERLVRDAEEDNEKFLLKLRERIDRVGICIPTIEARFEHLNVEAEAYVGSRALPTFFNFIVNTLENCLNYLHILSSKKKHVTILKDVSGIVKPCRMTLLLGPPSSGKTTLLLALAGKLDPNLKVSGGVTYNGHGMNEFVPQRTAAYIGQHDVHIGEMTVRETLAFSARCQGVGSRYDLLSELSRREIAANIKPDPYIDIYMKATASEGQEANQMMTEYILKILGLEICADTVVGDEMLRGISGGQRKRVTTGEMLVGPTNALFMDEISTGLDSSTTVQIMKCLRQIVHILNGTAVISLLQPEPETYELFDDIILLSDGQIVYHGPRQLVLQFFESMGFRCPERKGVADFLQEVTSRKDQEQYWVHKDEPYSFVRVNEFAVAFQRFHVGREIGDELSVPFDRTKNHPAALTTKKYGVNKKELLKANFSREYLLMKRNAFVYIFKLSQLAVMAVVAMTVFMRTEMHRDSVDNGGVYSGALFFTIVMVLFNGMPDISMTVAKLPIFYKQRDLLFYPAWAYAIPSWILKIPVTLTEVVVWVSITYYVIGFDPNVGRFFKQYFLLLLLGQMASALFRSIAAVGRNMIIANTFGSFAIVTLLTLGGFILSREDVKKWWIWGYWISPIMYEQNAMMVNEFLGQSWNHVLPNSTEPLGVEVLKSRGFFTHAFWYWIGVGALFGFVFLLNITFTLALTYLNPLEKPQAVLDDNGTESMSSSSASVRPEADVESSHRRKRGMILPFEPHSLTFDEITYSVDMPEEMKNRGVIEDRLVLLKGVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGRITISGYPKRQETYARISGYCEQNDIHSPHVTVYESLLYSAWLRLSPEVNSETRMMFIEEVMELVELNVLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVICTIHQPSIDIFEAFDELFLLKRGGQEIYVGPLGRHSNHLIEYFERIEGVSKIKDGHNPATWMLEITTSAREMDLNVDFADIYRNSELHRRNKALIAELSKPAPGFKELNFPTQYAQPFLIQCMACLWKQHWSYWRNPPYTAVRFLFTTFVALMFGTMFWDLGSKTRRKQDLFNAIGSMYNAILFLGTQNASSVQPVVAIERTVFYRERAAGMYSAIPYAIAQVAIELPYILAQAVTYGLIVYAMIGFEWTASKFFWYLFFMYFTFLYFTFYGMMTVAVTPNQHVASIVATAFYGIWNLFSGFIVPRPSIPVWWRWYYWACPVAWTLYGLAASQFGDVTSTIEFNETVKEFLRRYFGYRDDFVGVAACVVVGFAVLFAIIFAISVKVFNFQRR* 1423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2547 1422 Pfam ABC-2 type transporter 384 464 IPR043926 GO:0140359
Apr2g2547 1422 MobiDBLite consensus disorder prediction 787 803 - -
Apr2g2547 1422 Pfam ABC transporter 853 1005 IPR003439 GO:0005524
Apr2g2547 1422 Pfam ABC transporter 168 351 IPR003439 GO:0005524
Apr2g2547 1422 Gene3D - 154 461 IPR027417 -
Apr2g2547 1422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 426 IPR027417 -
Apr2g2547 1422 MobiDBLite consensus disorder prediction 786 811 - -
Apr2g2547 1422 CDD ABCG_PDR_domain2 822 1060 IPR034003 -
Apr2g2547 1422 Pfam ABC-2 type transporter 1151 1364 IPR013525 GO:0016020|GO:0140359
Apr2g2547 1422 Pfam ABC-2 type transporter 505 717 IPR013525 GO:0016020|GO:0140359
Apr2g2547 1422 Pfam Plant PDR ABC transporter associated 722 784 IPR013581 -
Apr2g2547 1422 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 825 1077 IPR003439 GO:0005524
Apr2g2547 1422 CDD ABCG_PDR_domain1 166 408 IPR034001 -
Apr2g2547 1422 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 152 426 IPR003439 GO:0005524
Apr2g2547 1422 PANTHER ATP-BINDING CASSETTE TRANSPORTER 8 1422 - -
Apr2g2547 1422 Coils Coil 82 102 - -
Apr2g2547 1422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 841 1062 IPR027417 -
Apr2g2547 1422 SMART AAA_5 177 410 IPR003593 -
Apr2g2547 1422 SMART AAA_5 862 1054 IPR003593 -
Apr2g2547 1422 Gene3D - 825 1070 IPR027417 -
Apr2g2547 1422 Pfam ABC-transporter N-terminal 86 143 IPR029481 -
Apr2g2547 1422 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 8 1422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2547 Apr-Chr2 29657681 29664895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2547 861 1037 Calmodulin-binding Proteins AT2G36910 27.322 3.83e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2547 K08711 - qsu:112019839 2211.8