Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2534 ATGTCACGTATTAGAAAAGTCATAGGAGGCCTCAAGCCTGCGTTTCTGATGGTGGTGGTTCAATTTTCTTATGCTGGGGTTAGCATTTTGTACAAAATGGTTGCAAATGATGGCATGAGTTTGAGTGTCCTTATGGCCTATCGCTTTCTCTTTGCATCTCTTTTCATGGTTCCTCTTGCCTACCTTGTCGAAAGAAAGAGCAAGCCACGAATCACAGTACAAGTACTCATTCAAGCATTTCTTTGTGGATTATTTGGGGCATCCTTACAACAAAATTTGTTCGTGGAAGCAGTGGCTTTGGCAAGTGCAACATATGCTACGGCCATGTACAACCTCATTCCTGGTGTTACATTTATCTTAGCCGTCATCTTTGGATTAGAAAGGCTGAACATTAAAGCATCAACAGGGAAAGCCAAGGTGCTTGGAACTGTGATGGGAATAGGTGGAGCCATGATGCTCACATTCTGTAAGAGCACTGAGATTCACATCTGGTCAACGCATGTGAACCTGATGCGACATCTACAGCCACACGATGTGCCTGAAACTCAAGTTTGGGGCACTTCTCTTGCTTTGGGCACTTGTGTATCCTATTCAATATGGTTGATAATTCAGGCTAGGATGAGCGAAAAGTTTCCCTGGCATTACACAAGTGCGGCATTGATGTCAGTGATGGCCTGCATTCAATCAATTATATTTGCTCTAGTGATGGAAAGAAAAAACTGGAGTCGTTGGAAGCTTGGCTGGAATATCAGACTTCTCACTGCAGTTTATACGGGTGTTGTGGCATCTGGACTGGCTTGGGTTCTCATAACGTGGTGCGTGTGCTTAAAGGGCCCACTTTTTGCTTCAATTTTCAACCCCCTCTTCCTAGTTCTAGTGGCCATTGCAGGGTCTCTGGTGTTGGATGAAAGGCTCCAATTGGGAAGCATAATAGGTTCATTATTGATTGTGTTGGGGCTATACACTGTCTTGTGGGGTAAAGGAGAAGAATTTAAGAGAACTATCAAGATGAAGCTAACAAAAGGCTCATTCGAAGTTGAATCATTGGAGACAATTACCAAAAATCATGCAAATGGTAAATGTTTTGAAAATGATAATAGTGACATGAATTCTGGTATTACTGTTACTACCGTAAAAGAAGGAAAAGGACAAAGTGAAGTGGAAGATGCTTCAACAAATGGGACCGGAGAAAATAAAATTAAGGAAATTCCAATTGACTATGAAGGACCAAAAAGGTAG 1239 0.4205 MSRIRKVIGGLKPAFLMVVVQFSYAGVSILYKMVANDGMSLSVLMAYRFLFASLFMVPLAYLVERKSKPRITVQVLIQAFLCGLFGASLQQNLFVEAVALASATYATAMYNLIPGVTFILAVIFGLERLNIKASTGKAKVLGTVMGIGGAMMLTFCKSTEIHIWSTHVNLMRHLQPHDVPETQVWGTSLALGTCVSYSIWLIIQARMSEKFPWHYTSAALMSVMACIQSIIFALVMERKNWSRWKLGWNIRLLTAVYTGVVASGLAWVLITWCVCLKGPLFASIFNPLFLVLVAIAGSLVLDERLQLGSIIGSLLIVLGLYTVLWGKGEEFKRTIKMKLTKGSFEVESLETITKNHANGKCFENDNSDMNSGITVTTVKEGKGQSEVEDASTNGTGENKIKEIPIDYEGPKR* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2534 412 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020|GO:0016021
Apr2g2534 412 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020|GO:0016021
Apr2g2534 412 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Apr2g2534 412 PANTHER WAT1-RELATED PROTEIN 12 359 - -
Apr2g2534 412 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 328 - -
Apr2g2534 412 MobiDBLite consensus disorder prediction 378 412 - -
Apr2g2534 412 PANTHER WAT1-RELATED PROTEIN 12 359 IPR030184 GO:0016021|GO:0022857
Apr2g2534 412 MobiDBLite consensus disorder prediction 378 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2534 Apr-Chr2 29547295 29549529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2534 11 332 Nodulin-like Gene Family AT1G25270 40.854 3.68e-85 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2534 - - aprc:113856022 793.497