Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2526 ATGGAGGGTATTGAGGATGGTGCAAGAGCAAGATATCCCTCAAACTCATCATATGGTATTAGTCACCACCCAGGTTATGGTTATTTGAATCAGCAGAAACTTCCTATCAGGAATTCTCCATATTCCCACTCTGTTGCTAATGAATATGGCCGCGCTAATAATAATAATGAAGAAGGTGAAGATGATGACCAAGAGCAGTTAGGAGGGGATGATGATGATGTTGATCAAAGGAACACTGTTCAGCTTTCCCAAAAGGATGCTGATGACAATGATGGTGAAGAAGATGAGATGGTTGGGCATGGTAATGAAAATGATGATAACAATAACAATGATGGTGATGATGAGGATGACACTAAGCAGAAAAGTTATGTCATGAAGACTGAGGATGATTTAGAGTGGCACCCAAAAAAGCAAAAGCTGAAGAGTTTGATTTCAGCTTATGAACTTGCTCCTCGGGTGCCAGCACCATCAGCTTCAGCTCCTAAACCATCTTTTGGGGGTAGAAATTCCCTTACTGACTGGACTGAGCAAGAGACATTTGTTCTTCTTGATGCATGGGGTGATCGGTTCCTTCAACATGGAAGGAAGAGTCTTAGATCTGAGGAATGGCAAGAAGTTGCAGAAAAGGTATCAGAAGTTTCAAAAATTGAGAAGACAGATACTCAGTGTAGAAATCGTTTAGATACATTGAAGAAAACATACAAAAAAGAGAAGGTTAAGTTTCCAGAAGGGGATGGTGGAGCTAGCAAATGGGTTTATTTTAAAAGAATGGATAGGCTGATGTCTTCTCCCCCGCAACAAGCAGGTCTCTCTTGTGGTTTGGACTCAGGAGAGTATGTTTTTATGAACCCTGGTGTTTATTTGAACCGTGCAAATGGGTTGGATGAAATGAGGGATAGTCCTGAGAATACAGAATCTACCGGTGAAGAAGGTTCTGATGATGGACCTCAAGCAAAGAAAAGAAGGAAAGGAAGGGGAAATGATGGTGTTTCTTCCTTCAGATTACTTGCTGGTTCCATTCAGAAATTCAGTAAGATATATGAGAAGATAGAGAATAGTAAAAGGCAGCAGATGGTGGAACTGGAAAAGATGAGGATGGGTTTCTATAAGGAATTGGAAACGCAGAAGAGGCAGATTTTAGAAAGATTGCAGAGTGAGATATCAAAACTAGAGCAGAGAGATAATGAGAAGGATGATTCTGCTGAGAATTTGTGA 1215 0.4066 MEGIEDGARARYPSNSSYGISHHPGYGYLNQQKLPIRNSPYSHSVANEYGRANNNNEEGEDDDQEQLGGDDDDVDQRNTVQLSQKDADDNDGEEDEMVGHGNENDDNNNNDGDDEDDTKQKSYVMKTEDDLEWHPKKQKLKSLISAYELAPRVPAPSASAPKPSFGGRNSLTDWTEQETFVLLDAWGDRFLQHGRKSLRSEEWQEVAEKVSEVSKIEKTDTQCRNRLDTLKKTYKKEKVKFPEGDGGASKWVYFKRMDRLMSSPPQQAGLSCGLDSGEYVFMNPGVYLNRANGLDEMRDSPENTESTGEEGSDDGPQAKKRRKGRGNDGVSSFRLLAGSIQKFSKIYEKIENSKRQQMVELEKMRMGFYKELETQKRQILERLQSEISKLEQRDNEKDDSAENL* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2526 404 MobiDBLite consensus disorder prediction 1 131 - -
Apr2g2526 404 Pfam Myb/SANT-like DNA-binding domain 173 260 IPR044822 -
Apr2g2526 404 MobiDBLite consensus disorder prediction 114 131 - -
Apr2g2526 404 MobiDBLite consensus disorder prediction 32 53 - -
Apr2g2526 404 Coils Coil 369 400 - -
Apr2g2526 404 ProSiteProfiles Myb-like domain profile. 174 231 IPR001005 -
Apr2g2526 404 Gene3D - 174 236 - -
Apr2g2526 404 PANTHER OS01G0718900 PROTEIN 51 403 - -
Apr2g2526 404 MobiDBLite consensus disorder prediction 71 87 - -
Apr2g2526 404 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 51 403 IPR044823 -
Apr2g2526 404 MobiDBLite consensus disorder prediction 295 331 - -
Apr2g2526 404 MobiDBLite consensus disorder prediction 312 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2526 Apr-Chr2 29491317 29493131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2526 328 403 Trihelix Transcription Factor Family AT3G14180 44.156 3.20e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr2g2526 Myb_DNA-bind_4 6.4e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2526 - - gmx:100779629 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2526 2 29491317 29493131 Apr2g2526 2 29491317 29493131 ECH