Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2524 ATGAGCGTGGTTGGGTTTGATTTTGGTAACGAAAGCTGCATTGTTGCTGTTGCGAGGCAAAGGGGGATTGATGTTGTGCTCAATGATGAGTCCAAGCGTGAAACACCTGCAGTTGTATGCTTTGGTGACAAGCAGCGGTTTCTTGGGACAGCTGGGGCTTCATCCACTATGATGAACCCAAAGAATTCGATCTCACAGATAAAACGGTTAATTGGTAGACAGTTTTCTGATCCAGAATTGCAGCAGGATCTGAAGTCATTGCCTTTTGCTGTCACTGAAGGACCAGATGGATATCCATTGATTCATGCACGGTACTTGGGTGAAGCCAAAGCCTTTACACCTACTCAAGTCTGGGGAATGATGTTATCAAACCTTAAGGAAATAGCCCAGAAAAATCTGAATGCAGCTGTTGTCGATTGCTGCATTGGAATTCCAGTTTATTTTACTGATCTTCAGAGGAGAGCAGTCTTGGATGCAGCCACTATTGCAGGTTTGCACCCACTTCGCTTGATTCACGAAACAACAGCAACTGCCTTGGCTTATGGAATTTACAAGACTGATCTTCCTGAAAATGATCAGCTGAATGTTGCCTTTGTTGATGTTGGACATGCTAGCATGCAAGTGTGCATTGCTGGATTTAAAAAGGGGCAGCTGAAAGTGTTGTCCCATTCATATGATAGGTCTCTGGGTGGCAGGGACTTTGACGAGGTTCTGTTTAATCATTTTGCTGCAAAGTTTAAGGAGGAATACAAGATTGATGTATTCCAGAATGCCAGGGCTAGTCTAAGGTTGAGGGCTGCTTGTGAGAAGCTGAAGAAGGTGCTTAGTGCAAACCCAGAGGCACCTCTGAATATTGAGTGCTTAATGGATGAGAAGGATGTCAGAGGCTATATCAAGCGGGATGAGTTTGAGCAACTAAGTCTTCCAATTTTGGAACGAGTAAAGGAGCCGCTGGAGAAGGCACTTGCAGAAGCAGGTCTCACAGTTGAGAATGTACACACTGTTGAGGTGGTTGGTTCTGGTTCTCGTGTTCCAGCTATAAACAAAATATTGACAGAGTTTTTCAAAAAGGAGCCTAGGAGGACAATGAATGCTAGTGAGTGTGTTGCCAGGGGTTGCGCACTGCAGTGTGCAATTCTTAGTCCAACTTTTAAAGTACGAGAGTTTCAGGTTCATGAAAGCTTTCCTTTCTCAATTTCTCTCTCGTGGAAAGGTTCTGGTCCTGATGTACAGGAAAGTGGACCAGATAATAAGCAAAGCACTCTTGTTTTCCCCAAGGGAAATCCCATACCAAGTGTTAAGGCACTGACAATCTACAGGCCAGGAACCTTTTCTATTGATGTTCAATATGATGATGTGAGTGGTTTGCAAACACCTGCAAAGATCAGCACATATACTATTGGTCCTTTCCAATCTACAACAAGTGAAAAGGCAAAAATTAAAGTGAAAGTTCGATTGAATCTGCATGGAATTGTATCTGTCGAGTCAGCAACTCTTCTGGAAGAGGAAGAAATTGAGGTTCCAGTTTCCAAAGAAACAGCTGGGGAAGATGCCAAGATGGAAACTGATGAAGCTCCTGCTGATGCTGCTGCACCTCCTAGCACCAATGACGACGATGTTAATATGCAAGATGCTAATGCCAAAGCAACTCCTGATGCCCCTGGAGCTGAAAATGGCATCCCTGAGACAGGAGATAAGCCTGTACAGATGGATACTGATACCAAGGTTGAGCCAAAGAGAAAAGTGAAGAAAATAAATGTTCCTGTGGCAGAGTTAGTTTATGGGACGATGGCTTCTGTGGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCCTTGCAAGATCGAGTGATGGAGGAAACAAAAGACAAGAAAAATGCAGTAGAGGCATATGTTTATGACATGAGAAACAAGGTGATGATTGTCATGTTTTTCTCATTATTTAAGGTGGAGTATTTGATTGTCACCGAAACTAATTACCTGTTGTCATTTCAGCTTAATGACAAATACCACGAGTTTGTCACTGACTCAGAGAGAGAGGCCTTTACTGCAAAACTTCAGGAGGTGGAAGACTGGCTATATGAGGATGGTGAAGATGAAACTAAAGGTGTATACATAGCCAAACTAGAAGAGCTTAAGAAGCAAGGCGATCCAATTGAAGAGCGTTACAAAGAATACATGGAGAGGGGTACTGTAATTGATCAGCTCACCTATTGTATAAATAGTTACAGAGCAGTTGCAATGTCAAATGATCCCAAATTCGATCACATTGACATCAACGAGAAACAGAAGGTCTTGAATGAATGTGTGGAAGCTGAGAACTGGCTTAGAGAGAAGCAGCAGCAACAGGACTCGCTTCCAAAATACGCCAACCCTGTACTCTTTTCAGCTGACATAAGAAAGAAAGCTGAAGCTGTTGACAGGTTCTGTAAGCCGATTATGACGAAACCAAAACCTCCTCCACCCAAGCCAGCCACTCCAGAAGCACCGGCAACCCCACCAACTCAGGGTGGTGAGCAGCAGCAACAGCAAGAACCACCAACGGAGAATGCTAATGCCAGCCCAAATGAGGATGCTGGGGAGGGTGGTAATCCAGTCCCCCCGCCAGCAGCTGCTGAACCGATGGAGACTGAAAAATCAGAGAACACAGGCACTGCCTAA 2664 0.4422 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFLGTAGASSTMMNPKNSISQIKRLIGRQFSDPELQQDLKSLPFAVTEGPDGYPLIHARYLGEAKAFTPTQVWGMMLSNLKEIAQKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLSHSYDRSLGGRDFDEVLFNHFAAKFKEEYKIDVFQNARASLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGYIKRDEFEQLSLPILERVKEPLEKALAEAGLTVENVHTVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVHESFPFSISLSWKGSGPDVQESGPDNKQSTLVFPKGNPIPSVKALTIYRPGTFSIDVQYDDVSGLQTPAKISTYTIGPFQSTTSEKAKIKVKVRLNLHGIVSVESATLLEEEEIEVPVSKETAGEDAKMETDEAPADAAAPPSTNDDDVNMQDANAKATPDAPGAENGIPETGDKPVQMDTDTKVEPKRKVKKINVPVAELVYGTMASVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKVMIVMFFSLFKVEYLIVTETNYLLSFQLNDKYHEFVTDSEREAFTAKLQEVEDWLYEDGEDETKGVYIAKLEELKKQGDPIEERYKEYMERGTVIDQLTYCINSYRAVAMSNDPKFDHIDINEKQKVLNECVEAENWLREKQQQQDSLPKYANPVLFSADIRKKAEAVDRFCKPIMTKPKPPPPKPATPEAPATPPTQGGEQQQQQEPPTENANASPNEDAGEGGNPVPPPAAAEPMETEKSENTGTA* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2524 887 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 550 IPR029047 -
Apr2g2524 887 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 660 724 IPR029048 -
Apr2g2524 887 CDD HSPA4_like_NDB 2 381 - -
Apr2g2524 887 Pfam Hsp70 protein 3 640 IPR013126 GO:0005524|GO:0140662
Apr2g2524 887 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 630 IPR029047 -
Apr2g2524 887 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 735 823 IPR029048 -
Apr2g2524 887 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Apr2g2524 887 Gene3D - 186 360 - -
Apr2g2524 887 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 640 - -
Apr2g2524 887 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 661 885 - -
Apr2g2524 887 Gene3D - 5 374 - -
Apr2g2524 887 Gene3D - 38 113 - -
Apr2g2524 887 MobiDBLite consensus disorder prediction 815 832 - -
Apr2g2524 887 Gene3D Actin; Chain A, domain 4 230 313 - -
Apr2g2524 887 PANTHER HSC70CB, ISOFORM G-RELATED 1 640 - -
Apr2g2524 887 PANTHER HSC70CB, ISOFORM G-RELATED 661 885 - -
Apr2g2524 887 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Apr2g2524 887 Gene3D - 732 818 IPR029048 -
Apr2g2524 887 MobiDBLite consensus disorder prediction 813 887 - -
Apr2g2524 887 Gene3D - 598 644 IPR029048 -
Apr2g2524 887 Gene3D - 656 731 IPR029048 -
Apr2g2524 887 MobiDBLite consensus disorder prediction 505 524 - -
Apr2g2524 887 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Apr2g2524 887 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 599 640 IPR029048 -
Apr2g2524 887 Coils Coil 710 730 - -
Apr2g2524 887 PRINTS 70kDa heat shock protein signature 2 15 - -
Apr2g2524 887 PRINTS 70kDa heat shock protein signature 30 42 - -
Apr2g2524 887 PRINTS 70kDa heat shock protein signature 140 160 - -
Apr2g2524 887 PRINTS 70kDa heat shock protein signature 332 348 - -
Apr2g2524 887 PRINTS 70kDa heat shock protein signature 363 383 - -
Apr2g2524 887 PRINTS 70kDa heat shock protein signature 477 493 - -
Apr2g2524 887 MobiDBLite consensus disorder prediction 834 858 - -
Apr2g2524 887 MobiDBLite consensus disorder prediction 505 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2524 Apr-Chr2 29480405 29485723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2524 4 406 Calmodulin-binding Proteins AT1G16030 36.946 1.46e-87 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2524 K09489 - gmx:100778196 1458.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2524 2 29480405 29485723 Apr2g2524 2 29480405 29485723 ECH
Apr2g2524 2 29480405 29485723 Apr2g2524 2 29480405 29485723 PCT