Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2522 ATGCCCAAAAAGTTTCAAGATTACCTCTTCAAGATCAAAAACCCACGCCCTCAAATTCGATTACCCTTTAACTCAATATCCTCTCCTAAGAACTGGGTTCTCTCTGGTTGCAAGCATCCAAGGACACCCTCTTTCGCCTTATACAACAGAAACGATGCTGATCATGGTAACAACAATAATCGCCACAACGACGATGCAGCCACCCTGGCGGACATAGATCGTTTCCTCTTCGAGAATTTCAAGTCTTTATACCTCAAAGACGACGAACAAACCGAAAACATTCACAACACCAAAAGGGTATCCGAAGATCAAAACCATGCAGAAGAAGAAGCTCCTACGCTAGGTTCTCTTTTGTTCGAGTCACCCAGGTTAGTGGAAACGCCACGTGATCTTTGTAGCTCCACTCGGTTCTTCGTGAAAACAGGGTTCTCTGGGTCACTAGTGGAGGATGCTCTAACGACCATGACAAACACGAGCGAGGAAGCAGGTTCGATCTCAACAACAACCTCAACCGCAACTCTCAACAATGTTTCATCACTTTCATCTTCAGATTCAAAGGAGGCTACGGAACACACTCTTCCCGATAACAGCATCGCTCTCTTAACGTACTCGCCGAGCCCCTACGAAGATTTCAAACGTTCCATGCAAGAAATGGTGGAAGCCAGGTCGAGGAACAACCTCATCAATTGGGATTTCATGGAAGAGCTTCTGTTTTGTTACCTAAACCTTAATGACAAAAAATCCCATAAGTTCATTCTCGGGGCTTTCGTCGATCTCATTACCTCCATGCGTTCAAATTCCGATGCTGTTCCGGCCAAGCCACGTAGCGTTCGAACTGTTAGGACTGTTCCCGAGTTGTGGAACGAGAACAAAGAAGTAACGTTAGAATTTGGGTCTTCCTAA 903 0.4551 MPKKFQDYLFKIKNPRPQIRLPFNSISSPKNWVLSGCKHPRTPSFALYNRNDADHGNNNNRHNDDAATLADIDRFLFENFKSLYLKDDEQTENIHNTKRVSEDQNHAEEEAPTLGSLLFESPRLVETPRDLCSSTRFFVKTGFSGSLVEDALTTMTNTSEEAGSISTTTSTATLNNVSSLSSSDSKEATEHTLPDNSIALLTYSPSPYEDFKRSMQEMVEARSRNNLINWDFMEELLFCYLNLNDKKSHKFILGAFVDLITSMRSNSDAVPAKPRSVRTVRTVPELWNENKEVTLEFGSS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2522 300 PANTHER TRANSCRIPTION REPRESSOR OFP14 3 278 - -
Apr2g2522 300 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 278 IPR038933 GO:0045892
Apr2g2522 300 ProSiteProfiles OVATE domain profile. 200 262 IPR006458 -
Apr2g2522 300 Pfam Transcriptional repressor, ovate 204 263 IPR006458 -
Apr2g2522 300 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 198 264 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2522 Apr-Chr2 29464464 29465366 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Apr2g2522 Ovate 1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2522 - - lja:Lj3g3v0160750.1 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2522 2 29464464 29465366 Apr2g2522 2 29464464 29465366 ECH
Apr2g2522 2 29464464 29465366 Apr2g2522 2 29464464 29465366 PCT