Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2515 ATGAATGTAGAAAACAAACGGTGGATATGGGTTCTTGTGATAGGAGGAGCTACTGCTGTACTTATATTCTGCTACCTTTGCTGCATCATCTGGAGAAAATGCAAGATAGAAGCTGACAGAAAAAAGGAGCAGAAGAAACTACTATCGGAAATTGGAGTCAGTAAGGTGTTTTCCACGGCCTATAACAAAACAAAACGACACCATAAAAATGGAAAAACCTACAATGAAATGCAGATATTTAGCTTTCCAATCATTGCTGCTGCTACAGACAACTTTTCAGTTGCAAATAAGTTAGGAGAGGGTGGCTTTGGACCAGTATACAAGGGGAGGCTTCCTGATGGACAAGAAATAGCAATAAAGAGACTTTCTAGTGGATCAGGGCAAGGGTTGGTAGAGTTCAAAAGTGAAGCCAAACTTGTAGCAAAACTGCAGCATACTAATCTAGTGAGGCTTTTGGGGTTCTGCATACAAAATGAAGAAAATATATTAATCTATGAGTACATGCCCAACAAAAGTTTAGACTTTCATCTGTTTGGATCTAACAAAAGGGAAACAATGGTTTGGGAAAAAAGATTCAGCATCATTGAAGGTATAGCTCATGGGCTGATTTATCTCCATCACTTTTCAAGATTAAAAGTGATTCACCGGGATTTGAAAGCTAGCAACATATTACTTGATTATGAGATGAAGCCAAAAATTAGTGATTTTGGCATGGCAATAATATTAGATTTGAATGGAATTGAAGAGAAGACAAAAAGAATTGTTGGAACATATGGTTACATGTCTCCGGAATATGCTATGAAAGGCGTTATTTCAACAAAGACTGATGTGTTTAGCTATGGAGTCTTGGTTCTTGAGATTATAAGTGGGAAGAAAAATAATTGTCGCTGTCATTCTGATTACCCCCTCAATCTTATTGAATTTGCATGGCAACTCTGGAATGAAGGTAAAGGTGTCGAGTTAATAGATTCATCAATGCTTGAATCATGCCATACAGCAGAAGTATTACGATGCATTCAGGTGGGCTTGTTATGTGTACAAGCCAATGCAGCAGATAGACCAACCATGTTAGAAATTTATTCAATGCTTGCAAATCAAACTCTTTTCCTCCCTGTCCCTAAACAGCCTGCATATTTTAGTGATCCATTTGCAAATGAAACAAATGCGTCAGTGGGAAAACAAGAATCTTTCTCCAACAATGAGGTGACAATTTCAGTGATGTATGCCAGATAA 1233 0.3771 MNVENKRWIWVLVIGGATAVLIFCYLCCIIWRKCKIEADRKKEQKKLLSEIGVSKVFSTAYNKTKRHHKNGKTYNEMQIFSFPIIAAATDNFSVANKLGEGGFGPVYKGRLPDGQEIAIKRLSSGSGQGLVEFKSEAKLVAKLQHTNLVRLLGFCIQNEENILIYEYMPNKSLDFHLFGSNKRETMVWEKRFSIIEGIAHGLIYLHHFSRLKVIHRDLKASNILLDYEMKPKISDFGMAIILDLNGIEEKTKRIVGTYGYMSPEYAMKGVISTKTDVFSYGVLVLEIISGKKNNCRCHSDYPLNLIEFAWQLWNEGKGVELIDSSMLESCHTAEVLRCIQVGLLCVQANAADRPTMLEIYSMLANQTLFLPVPKQPAYFSDPFANETNASVGKQESFSNNEVTISVMYAR* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2515 410 Pfam Protein tyrosine and serine/threonine kinase 94 362 IPR001245 GO:0004672|GO:0006468
Apr2g2515 410 SMART serkin_6 92 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2515 410 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 383 - -
Apr2g2515 410 Gene3D Transferase(Phosphotransferase) domain 1 168 369 - -
Apr2g2515 410 CDD STKc_IRAK 98 363 - -
Apr2g2515 410 ProSiteProfiles Protein kinase domain profile. 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2515 410 SUPERFAMILY Protein kinase-like (PK-like) 74 385 IPR011009 -
Apr2g2515 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Apr2g2515 410 Gene3D Phosphorylase Kinase; domain 1 65 167 - -
Apr2g2515 410 PANTHER OS01G0783800 PROTEIN 5 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2515 Apr-Chr2 29433190 29436197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2515 63 410 Receptor kinase-like Gene Family AT4G05200 49.721 1.27e-120 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr2g2515 PK_Tyr_Ser-Thr 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2515 - - aprc:113853906 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2515 2 29433190 29436197 Apr2g2515 2 29433190 29436197 ECH