Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2512 ATGAACGGTGCAGGGAGACAGGGGCTGAGATCTGGTGCCACGGGGGTGCACCACCAGCGCCAGCACTCCGACAACTTTCTCGACGGCTCCTCCAACGGCAACAGATGGCTCCAGTCGGCTGGCCTTCAACATCTCCAATCATCCGCCAATCCCATTCCTCCGCTTCAGGACTATAACATGTACGGCGGTGGCGGTGGAGCGCAGGGAGGAAGAATGTACAGGAATGCGCCGCAGAGGGGCTTCAATGGAGGAACTGAGTATTACGTGGAGCCATCCACGCCTCCCGGCGGTTACCGTGCCTCGACGCAGAAAAAAAATGGTGAAGATTCGCCCGGCGATTTCAGCCCCGGCTTGTTGGATCTGCATTCATTCGACACTGAGCTTCTTCCCGAGATGCCAGCCTCCAATGCATATGATGCCAATGCTCTGTTTCAACCTGGCCGGGGTAGAAGCTTTGATGACTCTGAACCTTACATGTTGAGCAAACAGACTGGCAGAGCTCGTGCTCCTGAAAACATATTGAAAAGTTTTCCTGCAGACAAAGAGAAATCTAATACTGTGGCAAAGATTAAAGTTGTGGTTCGTAAGAGACCAATGAACAAGAAGGAATTAACAAAGAATGAGGAAGACATTATAGAAACATATTCCAATTCTTTAACAGTTCATGAAACTAAATTAAAGGTCGATCTAACTCAGTATGTAGAGAAGCATGAATTTGTTTTTGATGCTGTTTTGAATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACGGTAGAGCCCATAGTTCCAATAATCTTTGAACGCACTAAGGCAACTTGCTTTGCATATGGGCAAACAGGAAGTGGAAAAACTTACACAATGAAGCCACTGCCACTTAAAGCATCAAGGGACATCCTTAGATTGATGCATCATACTTACAGGAATCAGGGATTTCAATTGTTTGTGAGTTTCTTTGAAATATATGGTGGGAAGCTCTTTGATCTCCTTAATGATCGAAAAAAACTTTGTATGAGAGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAGTACCGTGTATCAGATGTGGAGAATATCAAAGAACTGATTGAGAGAGGAAGTTCCACAAGAAGTACAGGCACCACGGGTGCAAACGAGGAATCTTCACGGTCACATGCAATCCTTCAGCTTGCTATCAAGAGATCAATTGATGGCAATGAATCCAAACCTCCTCGTTTGGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGCGAACGTGGAGCAGATACTACAGATAATGACAAACAGACAAGGATTGAAGGTGCTGAAATCAATAAGAGCTTACTTGCCCTAAAGGAATGCATAAGAGCTCTTGATAATGACCAAGGACACATCCCTTTCAGAGGCAGTAAACTGACTGAAGTTTTGAGGGATTCATTTGTTGGCAATTCCCGCACTGTTATGATATCATGCATATCACCAAGCTCTGGTTCATGCGAACATACACTGAACACATTAAGATATGCAGACAGGGTAAAAAGCCTATCAAAAGGAAACACTTCAAAGAAAGATGTTTTATCATCAAATTTCAACCTTAAAGAATCAACTGCCGTTCCCTTGTCTTCTGTTACTGGATTGGCCTATGAGGATCGCCCAACTGATGCATGGAATGATGAGAATGAAGGGGATGATTTTAGCCCCCCTGAAGAGTATTATGAGCAGGTGAAACCATCATTGAAGAAAAATGGAAAGATGGAGTTATATGCTGCAACTGATGACAAATTGAAGAAACAAAGTGGTCAGATCAAATGGAAGGACCTCCCGAAAGTTGATCCTCAAATCACACATAATGAGGATGATTTAAATGCCCTCTTACAGGAAGAAGAGGACCTTGTAAATGCTCACCGTACCCAAGTGGAAGAGACCATGAACATTGTTAGAGAGGAGATGAACCTCCTGGTTGAAGCAGATCAACCAGGGAATCAGCTGGATGATTATATAACAAGACTAAATGCCATTCTTTCTCAGAAGGCTGCTGGCATCCTGCAGCTGCAAACCCGTTTAGCTCATTTTCAGAAACGTTTAAAGGAGCACAATGTTTTGGTTTCATCTACTGGATACTAA 2115 0.4392 MNGAGRQGLRSGATGVHHQRQHSDNFLDGSSNGNRWLQSAGLQHLQSSANPIPPLQDYNMYGGGGGAQGGRMYRNAPQRGFNGGTEYYVEPSTPPGGYRASTQKKNGEDSPGDFSPGLLDLHSFDTELLPEMPASNAYDANALFQPGRGRSFDDSEPYMLSKQTGRARAPENILKSFPADKEKSNTVAKIKVVVRKRPMNKKELTKNEEDIIETYSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVENIKELIERGSSTRSTGTTGANEESSRSHAILQLAIKRSIDGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNTSKKDVLSSNFNLKESTAVPLSSVTGLAYEDRPTDAWNDENEGDDFSPPEEYYEQVKPSLKKNGKMELYAATDDKLKKQSGQIKWKDLPKVDPQITHNEDDLNALLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNQLDDYITRLNAILSQKAAGILQLQTRLAHFQKRLKEHNVLVSSTGY* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2512 704 ProSitePatterns Kinesin motor domain signature. 411 422 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr2g2512 704 MobiDBLite consensus disorder prediction 367 386 - -
Apr2g2512 704 PRINTS Kinesin heavy chain signature 269 290 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g2512 704 PRINTS Kinesin heavy chain signature 378 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g2512 704 PRINTS Kinesin heavy chain signature 412 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g2512 704 PRINTS Kinesin heavy chain signature 462 483 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g2512 704 CDD KISc_KIF2_like 189 510 - -
Apr2g2512 704 PANTHER KINESIN-RELATED PROTEIN 6 1 704 - -
Apr2g2512 704 MobiDBLite consensus disorder prediction 368 386 - -
Apr2g2512 704 Gene3D Kinesin motor domain 168 515 IPR036961 -
Apr2g2512 704 PANTHER KINESIN-LIKE PROTEIN KIN-13B 1 704 - -
Apr2g2512 704 MobiDBLite consensus disorder prediction 14 34 - -
Apr2g2512 704 MobiDBLite consensus disorder prediction 83 119 - -
Apr2g2512 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 512 IPR027417 -
Apr2g2512 704 Pfam Kinesin motor domain 195 511 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g2512 704 ProSiteProfiles Kinesin motor domain profile. 189 512 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g2512 704 SMART kinesin_4 187 518 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g2512 704 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2512 Apr-Chr2 29409918 29415504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2512 189 522 Calmodulin-binding Proteins AT5G65930 34.770 1.54e-45 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2512 K10393 - gmx:100810966 1297.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2512 2 29409918 29415504 Apr2g2512 2 29409918 29415504 ECH