Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2495 ATGATGGCTGGGAACCCTAACTGGTGGAGCATGCATCCACCATCTTCGATGATCTCTCCTCAATATGTGATTCCATCTTCTTCAATTCCTTTTAATTCTTTGACAGAAAATCTAGAGCCTCCTCAGTCATGGAGCCAACTGCTTTTTACTGGAATAGCCGGGGAAGAAGAGAGACTGGGTTTCAGTCATTTTCAACCTAAGAAATTCGAAAACTGGGATGCCCAGATTCTCAACACACCTTCCAGAGTTCCGATTCTTGATGTAATAAAGCAAGAAGTTTCTCAAAGTGGGAATTTGTACGGCCATGGGCGTGAGGAATTTCAGGCTTCTGGACCAACAGACTCATCTTGGTCTCATATGGTGCCAGTTTCTTCCCCCAGGTCTTGTGTCACTAGCTTGAGTAGTAACAATATGTTGAATTTCACTTATAACAAGGGAGATCATAGGAAAAATCAACTTCCAGATCAAACATCTGAGTGTGATAGCACAATTGGAATTTGTAAGAATGCTAGGGTTCATGCATCTTCAAGCCAAGCATCTCTGAAGGTGAGGAAGGAGAAGCTAGGAGATAGAATAACAGCACTTCACCAGCTAGTTTCCCCGTTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATATATAAGGTTCCTGCAGGGTCAAATTGAGGCACTCAGCTCTCCTTACTTGGACAATGCATCAAAAAACATGAGGAATCAACAGTCTGTACATGGAGAAAGAAATTCTGTTTTTCCAGAGGACCCCGGTCAGCTGTTGAATGACAATAATGGCCTCAAAAAAAGAAAGGGAGCCCCAAACCAGGATGCAGAAGAAAAGGCAAAGGACCTAAGGAGTAGGGGGTTGTGCTTGGTCCCCGTGTCTTGTACCCAACATGTTGGAAGCGAAAATGGGGCCGATTACTGGGCACCAGCATACGGCAGTGGATGTTAA 960 0.4427 MMAGNPNWWSMHPPSSMISPQYVIPSSSIPFNSLTENLEPPQSWSQLLFTGIAGEEERLGFSHFQPKKFENWDAQILNTPSRVPILDVIKQEVSQSGNLYGHGREEFQASGPTDSSWSHMVPVSSPRSCVTSLSSNNMLNFTYNKGDHRKNQLPDQTSECDSTIGICKNARVHASSSQASLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLDNASKNMRNQQSVHGERNSVFPEDPGQLLNDNNGLKKRKGAPNQDAEEKAKDLRSRGLCLVPVSCTQHVGSENGADYWAPAYGSGC* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2495 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 182 233 IPR036638 GO:0046983
Apr2g2495 319 PANTHER OS05G0228400 PROTEIN 20 306 - -
Apr2g2495 319 CDD bHLH_AtbHLH_like 182 229 IPR045239 -
Apr2g2495 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
Apr2g2495 319 Gene3D - 174 247 IPR036638 GO:0046983
Apr2g2495 319 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 20 306 - -
Apr2g2495 319 MobiDBLite consensus disorder prediction 240 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2495 Apr-Chr2 29316790 29320110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2495 1 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 39.339 2.53e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2495 - - gmx:100802121 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2495 2 29316790 29320110 Apr2g2495 2 29316790 29320110 ECH