Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2464 ATGGCTGGAAAATGGACATGCCATTGGACTTGGAGCTGCATGGTGTGGTGTGTCCTTGCATATACCGTTGCAGAATTTACTGGAAAGTCCATAGTTATGGCCACAGACGAAAATTATATGCATCACAAACAACAAAGAAGGAAGCTAGATGATGTTACTGGCTCTATTTGCATTGATTGTGGGATACCAGGAGACCTAGCCTATACTGATGACAAGACTCAGATTCATTACACTTCGGATACACAGTATATTCAAACCGGAACAAGCAGAAACACATCCTTCAAGTTCATTTCTCAAATAACCCAAAGAACTTTCAGAACTGTGAGAAGCTTTCCTGAGGGTAAGAGGAATTGCTACACGCTAAGACATCCAGAAGGGAAAAATACGATTTACTTGATCAGAGCTTCTTTCATGTATGGGAACTATGATGACTTGGATCAGCTGCCAAAATTTGATCTTTATATTGGGGTTAATTTATGGGACTCTGTGATGTTTAACAATGCCACTCATGTGGTAATCAAGGAGATTTTACACGTTCCATCCATGGATGATTTATATGTTTGCTTATTGAACACTGATATGGGAACCCCTTTTATATCAGCACTGGAGGTGAGACATTTTGATCATTCCAGTTATAGAACCAAGTCTGGACCCTTAGCTTTATATAGACGTTTAGACATTGGCTCAACAACCGATGAAATAGTGAGGTTTGACAAAGATGTGTATGATCGAATGTGGTACCCTTACAACTTACCTGACTCTACACCAATCAATACTTCCTTCATCATTGACTCCTTGAACCACACTGCATATCATCTGCCATCAACAGTAATGAGAAGTGCTGTGAAGCCAACAAATGAAAATGATTCCCTGGAATTTGAATTTGACACTGGATATCCTGCTTCAGAGTCCTATGTTTACATGCACTTTGCTGAAATACAAGAGCTTCAGGAAAATGAAAAAAGGGAATTTGACATTACATTGAATGGAAATTTATGGGCTGAATCTGTAAGTCCCAAGTATTTGCATTCAACTACAATATATAGTGAACAGTCCATTAGGGGAAGTAAGCTCACATTCTCTATGCACAAGAAACCAAATTCAACTCTTCCTCCCATGCTAAATGCAATGGAGATTTACATTGTTAAGGAATTCTTGCATTCACCTACAAACCAACAAGATGTTAAGGCTATCATGGACATCAAAAGACATTACATGTGGACATCGTCGTTGGGTAAATCATGGCAAGGAGATCCTTGTGCACCACTGAAATACACTTGGAATGGTCTAAACTGCAGCAATAATGGTTATGATTCGCCCACAATAACTGCATTAAACCTGGCCTCCAGTGGATTAGGTGGCACAATAATTGCATCCTTTTTGGAGCTCAAATTCTTAGAATCCTTGGATTTATCAAACAATAGCTTAACAGGATCACTGCCTGACTTTTCACAACTGCAATACTTGAAGACCCTAAATTTATCAGGGAACAGGTTCTCAGGTGAAATTCCTTCACTTCTCAAGGAAAGATCAAAAAATGGTTCACTTTTATTAAGGGTGGATGGATATCCGGAGCTCTGCCTGATGGCCCCATGTGAAGAGGACAAAAAGAATATTTTCCCACTTGTTGCAGGCATTCTTTCATTAGTGGTCTTCTTAATTGTACTGAGTATTGTACTTACTATCATTTGGAGACGGAGATGCAACAGAAAATCAGCATCAAAGCAAGCTGTGAGATCAAGCCAAGAAGTTGTACTGAAGACAGACAGTAAACAGTTCACGTACTCTCAGATACTGGCTATTACCAATAACTTTGAGAAATTGATTGGGAAGGGAGGATATGGAATAGTTTATTACGGTTCTTTAAATGATGGCACACAAGTTGCTGTCAAAATTCTCATGCCAAAATCACCTCAAGGTTCTCAGCAGTTTCAGACTGAGGCTCAACTCTTAATGCGTGTTCATCACAGGAACTTAGCTTCCTTTCTTGGATACTGTAATGAAGTTGGACACACGGCCATCATCTACGAATACATGGCTTATGGGAACTTGGAGGAGTATCTTTCAGATGCTAGGAGAGAACCATTGAGTTGGAGACAGAGGATTCAGATAGCAGTTGATGCTGCTCAAGGTCTTGAGTACTTGCATCATGGTTGCAAGCCGCCAATAATCCATAGAGACATTAAGACTGCAAACATTTTACTTAACGAGAAAATCCGAGCAAAAGTTGCTGATTTTGGTTTCTCAAAATTTTTATCAACTGAAAATGAAAGTCACATATCAACTGCAGTTGTTGGCACATTTGGATATCTTGATCCAGAATACTACACATCCAGTAGGCTGACCGAGAAAAGTGATGTCTATAGTTTTGGTATTGTGCTTTTGGAGCTAATAACTGGGCAGCCAGCTATAATAAAAGGTCATGAGAACACTCACATTGTGCAATGGGTTAGCCACTTTCTTCCAAGAGGAGATATTCGACAAATTGTTGATCCAAAGATGCAAGGAGATTTTGATTTTGGTTCAATGTGGAAGGCTGTGGAGGCAGCAATAGCTTGTGTGCCTCCAATTTCTATCCAGAGAGCATCAATGAGTAACATTGTCACAGAACTGAAAGAGTGCTTAGAAATGGAAGCAGCCCGAGAACAAAAAGGCATCAATGAGCAAATTTCTAATTCAAACTCGTTTTCAATGAATGTTGTTGATCTTGAAGCTGATTATGGCCCGGATGCAAGATAA 2739 0.3961 MAGKWTCHWTWSCMVWCVLAYTVAEFTGKSIVMATDENYMHHKQQRRKLDDVTGSICIDCGIPGDLAYTDDKTQIHYTSDTQYIQTGTSRNTSFKFISQITQRTFRTVRSFPEGKRNCYTLRHPEGKNTIYLIRASFMYGNYDDLDQLPKFDLYIGVNLWDSVMFNNATHVVIKEILHVPSMDDLYVCLLNTDMGTPFISALEVRHFDHSSYRTKSGPLALYRRLDIGSTTDEIVRFDKDVYDRMWYPYNLPDSTPINTSFIIDSLNHTAYHLPSTVMRSAVKPTNENDSLEFEFDTGYPASESYVYMHFAEIQELQENEKREFDITLNGNLWAESVSPKYLHSTTIYSEQSIRGSKLTFSMHKKPNSTLPPMLNAMEIYIVKEFLHSPTNQQDVKAIMDIKRHYMWTSSLGKSWQGDPCAPLKYTWNGLNCSNNGYDSPTITALNLASSGLGGTIIASFLELKFLESLDLSNNSLTGSLPDFSQLQYLKTLNLSGNRFSGEIPSLLKERSKNGSLLLRVDGYPELCLMAPCEEDKKNIFPLVAGILSLVVFLIVLSIVLTIIWRRRCNRKSASKQAVRSSQEVVLKTDSKQFTYSQILAITNNFEKLIGKGGYGIVYYGSLNDGTQVAVKILMPKSPQGSQQFQTEAQLLMRVHHRNLASFLGYCNEVGHTAIIYEYMAYGNLEEYLSDARREPLSWRQRIQIAVDAAQGLEYLHHGCKPPIIHRDIKTANILLNEKIRAKVADFGFSKFLSTENESHISTAVVGTFGYLDPEYYTSSRLTEKSDVYSFGIVLLELITGQPAIIKGHENTHIVQWVSHFLPRGDIRQIVDPKMQGDFDFGSMWKAVEAAIACVPPISIQRASMSNIVTELKECLEMEAAREQKGINEQISNSNSFSMNVVDLEADYGPDAR* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2464 912 ProSitePatterns Protein kinases ATP-binding region signature. 609 631 IPR017441 GO:0005524
Apr2g2464 912 PRINTS Leucine-rich repeat signature 466 479 - -
Apr2g2464 912 PRINTS Leucine-rich repeat signature 486 499 - -
Apr2g2464 912 ProSiteProfiles Protein kinase domain profile. 603 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2464 912 Gene3D Ribonuclease Inhibitor 393 516 IPR032675 -
Apr2g2464 912 Pfam Malectin-like domain 58 381 IPR024788 -
Apr2g2464 912 Gene3D Transferase(Phosphotransferase) domain 1 679 899 - -
Apr2g2464 912 PANTHER KINASE-TRANSFORMING PROTEIN RAF, PUTATIVE-RELATED 32 912 - -
Apr2g2464 912 SMART serkin_6 603 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2464 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 723 735 IPR008271 GO:0004672|GO:0006468
Apr2g2464 912 SUPERFAMILY L domain-like 405 507 - -
Apr2g2464 912 Pfam Leucine rich repeat 441 499 IPR001611 GO:0005515
Apr2g2464 912 SUPERFAMILY Protein kinase-like (PK-like) 582 871 IPR011009 -
Apr2g2464 912 ProSiteProfiles Leucine-rich repeat profile. 465 487 IPR001611 GO:0005515
Apr2g2464 912 PANTHER OS07G0107800 PROTEIN-RELATED 32 912 - -
Apr2g2464 912 Pfam Protein tyrosine and serine/threonine kinase 605 817 IPR001245 GO:0004672|GO:0006468
Apr2g2464 912 Gene3D Phosphorylase Kinase; domain 1 585 678 - -
Apr2g2464 912 ProSiteProfiles Leucine-rich repeat profile. 488 510 IPR001611 GO:0005515
Apr2g2464 912 CDD STKc_IRAK 609 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2464 Apr-Chr2 29080714 29085519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2464 48 885 Receptor kinase-like Gene Family AT2G19210 47.468 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Apr2g2464 Malectin_like 1e-109 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2464 - - aprc:113853796 1832.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2464 2 29080714 29085519 Apr2g2464 2 29080714 29085519 ECH