Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2461 ATGAGAATGCCGATGAATTTCCTTGTTTCTTTTCTAGGTGGTCTAGTTCTTGCAGTTCTGATTCAAGCCCAAGATCAATCAGGGTTCATCAGCATAGATTGCGGGGGTGCTGCGGGTATCAGCTATACTGTGACGACAACAGGTGTAAATTATACTTCAGATGCAAAGTTCATAAATAGTGGTGTAAGAAGAACAATAGCAACTGAACTCAAAACTCGCTATCAGCGACAACTGTGGAATCTCAGAAGCTTCCCGCAAGGAAGAAGGAACTGCTACAAAATAAACATCACAAGAGGCTCTAATTATCTGATTCGGACTGTTTTTTTGTATGGAAATTATGATGGCCTAAATAAGTTACCACAGTTTGATATTCTTCTTGGGCCAAACCGGTGGGTTACAGTGACTATTCAGAATGCAAATGAAGACCAAAGCAACGAGATTATACATGTATCTTCATTGGATCACATACACATTTGTCTGGTTGATACGGGCTCTGGGACACCATTTATATCATCTATAGAATTGAGGACTTTGAAAAATGATACTTATGTCCCTCAGTTTGGATCGTTGGAAACTTACGAACGGTGGAATTATGGTTCAGACGAAGACTACAGGTACAGCTACGATGTTTATGATCGTTACTGGAATGGCTATGGTAACAACAGTGATTGGACACAACTAAGTGCTTCGGTTGATGCTGATTCTTTAAACCAGAACGATTACAAACCACCAGCTATTGTCATGAGCACTGCAAGTACACCAAAAAATGCAAGTGCTCCATTAGTAATAAGTTGGGAGCCAAAAGATCAAAATGAGCAATTCTATCTTTACATGCACTTCCTGGAGATTCAAGTGTTAGCAAAGAATCAGACAAGGGAATTCAACATCATCCAAAATGGGGCTCTATGGTATGACAATTTAATTCCAGATAACCAAGCCGTAAACACAATATATAGCATGCAAGCCTTGAGTGGGAAAGAAATTATATTTTCGCTTGAGAAGACCAAGAATTCAACCTTGCCTCCCATCATCAATGCCATCGAAATTTACAAAGTAATAGAACTTCAGCAATCAGATACATTCCAAGGAGATGTTGATGCAATTACAACGATCCAGTCAATTTATGGGGTGACAAGAGATTGGCAAGGTGATCCATGTAGCCCTCTAGCCTACTTGTGGGATGGCTTAAATTGTACATACCGTGGAAATGATTCCCCAAGAATCACAACTTTGAATTTATCTTCAAGTGGATTGTCAGGAAAGATAAATCCTTCAATTTCAAAGCTCACCATGCTGGAGAAGTTGGATTTATCAAACAATAGATTAATTGGCGAAGTTCCTGATTTTCTGTCTCAATTACAAAACTTGAAGATCTTAAACTTGGAGAACAACAACCTCACTGGAGCAATTCCCTCGACGCTACTTCAAAAATCTAAGGAAGGTTCATTATTGCTAAGTGTGGGCCAAAATCCCCATCTATGTGAATCTGGTCAATGCAACGAGGGGAAGAAAAAGAAGAAGAACATTGTTGCACCTATAGTAGCTTCAATTTGTGGGGTTTTGATCCTTATCGTGGCCGTGGCAGCTATATTGTGGACCCTTAAAAAGAGAAAACCAAAAGAAAATGATCAAAGTGAGATCTCGCGGCAATACACAGAACAAGATGATTCATTTCTGCAATTCAAAAAACAAATATATTCATACTCTGATGTCCTTAAAATCACCAACAACTTCAATAGAGTTGTTGGAAAAGGTGGGTTTGGAACAGTTTATCTGGGCTATATTGATGACATTCCTGTTGCAGTGAAGATGCTTTCTCCATCGTCAGTTCATGGTTATCAACAGTTCCAGGCAGAGGTTAAACTTTTAATGAGAGTTCATCATAGAAATCTAACATCCCTTGTGGGGTATTGTAATGAAGGAACCAATAAGGGTCTCATATACGAGTACATGGCTAATGGAAACTTACAAGAGCATCTCTCTGGTATACACAGCAAAACAAAATTCTTGACCTGGGAAGACAGACTTCGTATAGCATTGGATGCAGCCTTAGGATTGGAGTATCTGCAAAATGGTTGCAGGCCACCCATAATCCATAGAGATGTAAAATCTACGAACATATTGTTGAATGAACACTTCCAAGCAAAATTATCTGATTTTGGTCTATCCAAAGTTATCCCAAATGACGGGGGAACTTATGTGTCAACTGTAATTGCTGGTACTCCTGGTTATCTGGACCCAGAATACTACATATCCAACAGGTTAACAGAGAAAAGTGATATTTACAGCTTTGGAGTTGTTCTTTTGGAGATAATCTCAAGCCAACCAGTGATAGCAAAGAATCAAGAAAGGACTCACATAAGTCAATGGGTTAACTCTTTGATCGCAAAAGGGGATATCAAGGCCATTGTTGACTCAAGGTTAGAAGGAGATTTTGACAGTAACTCAGTTTGGAAAGCAGTAGAAATAGCAACGGCTTGTTTGTCTTCAAATCTCAACAAAAGGCCAACCATAAGTGTGATAGTGGCTGAACTAAAGGAGTCTTTAGCAACAGAATTATCTCGAACCAAATATAGCAGCCGTGTTACCGATACAAGAGATTCGCTGTTCACTATGGATTTGAATACTGATTTCGCTCCCCTGGCCAGATAA 2652 0.3933 MRMPMNFLVSFLGGLVLAVLIQAQDQSGFISIDCGGAAGISYTVTTTGVNYTSDAKFINSGVRRTIATELKTRYQRQLWNLRSFPQGRRNCYKINITRGSNYLIRTVFLYGNYDGLNKLPQFDILLGPNRWVTVTIQNANEDQSNEIIHVSSLDHIHICLVDTGSGTPFISSIELRTLKNDTYVPQFGSLETYERWNYGSDEDYRYSYDVYDRYWNGYGNNSDWTQLSASVDADSLNQNDYKPPAIVMSTASTPKNASAPLVISWEPKDQNEQFYLYMHFLEIQVLAKNQTREFNIIQNGALWYDNLIPDNQAVNTIYSMQALSGKEIIFSLEKTKNSTLPPIINAIEIYKVIELQQSDTFQGDVDAITTIQSIYGVTRDWQGDPCSPLAYLWDGLNCTYRGNDSPRITTLNLSSSGLSGKINPSISKLTMLEKLDLSNNRLIGEVPDFLSQLQNLKILNLENNNLTGAIPSTLLQKSKEGSLLLSVGQNPHLCESGQCNEGKKKKKNIVAPIVASICGVLILIVAVAAILWTLKKRKPKENDQSEISRQYTEQDDSFLQFKKQIYSYSDVLKITNNFNRVVGKGGFGTVYLGYIDDIPVAVKMLSPSSVHGYQQFQAEVKLLMRVHHRNLTSLVGYCNEGTNKGLIYEYMANGNLQEHLSGIHSKTKFLTWEDRLRIALDAALGLEYLQNGCRPPIIHRDVKSTNILLNEHFQAKLSDFGLSKVIPNDGGTYVSTVIAGTPGYLDPEYYISNRLTEKSDIYSFGVVLLEIISSQPVIAKNQERTHISQWVNSLIAKGDIKAIVDSRLEGDFDSNSVWKAVEIATACLSSNLNKRPTISVIVAELKESLATELSRTKYSSRVTDTRDSLFTMDLNTDFAPLAR* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2461 883 SMART serkin_6 576 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2461 883 Gene3D Phosphorylase Kinase; domain 1 559 650 - -
Apr2g2461 883 Pfam Protein tyrosine and serine/threonine kinase 578 845 IPR001245 GO:0004672|GO:0006468
Apr2g2461 883 PANTHER OS07G0107800 PROTEIN-RELATED 15 883 - -
Apr2g2461 883 Gene3D Ribonuclease Inhibitor 366 483 IPR032675 -
Apr2g2461 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672|GO:0006468
Apr2g2461 883 SUPERFAMILY Protein kinase-like (PK-like) 555 845 IPR011009 -
Apr2g2461 883 Pfam Malectin-like domain 32 352 IPR024788 -
Apr2g2461 883 Gene3D Transferase(Phosphotransferase) domain 1 651 868 - -
Apr2g2461 883 ProSitePatterns Protein kinases ATP-binding region signature. 582 603 IPR017441 GO:0005524
Apr2g2461 883 Pfam Leucine Rich Repeat 432 451 IPR001611 GO:0005515
Apr2g2461 883 Pfam Leucine Rich Repeat 455 474 IPR001611 GO:0005515
Apr2g2461 883 CDD STKc_IRAK 582 847 - -
Apr2g2461 883 ProSiteProfiles Protein kinase domain profile. 576 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2461 883 SUPERFAMILY L domain-like 365 474 - -
Apr2g2461 883 PANTHER PUTATIVE-RELATED 15 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2461 Apr-Chr2 29050111 29057443 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2461 7 883 Receptor kinase-like Gene Family AT1G51800 49.721 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Apr2g2461 Malectin_like 2.5e-116 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2461 - - gmx:100785345 1334.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2461 2 29050111 29057443 Apr2g2461 2 29050111 29057443 ECH
Apr2g2461 2 29050111 29057443 Apr2g2460 2 29043915 29049215 PCT