Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2460 ATGGCAGGACTAAACTTTCTACTTTTAATGTTTCTACTTTCTCTGACTCTTCTTATCATTGTTCATGCCCAGAGTCAATCAGACTTCATTAGTATTGATTGTGGACTTGATGAACCAAGCTACACAGATGGAACAGCTTTCATATATTATACTTCAGATGTTAACTTCACAAGCAATGGTGTAAGCCATAGCATATCACCAAAATATGAGGCTTTGCTTGACAAACAGTTTTGGAATGTTAGAAGCTTCCCAGAAGGAACAAGGAACTGCTATACCCTTGTTGTTCCTCAAGGAAGTAACAAGAAGTATTTAGTGAGGGCCAGGTTTGCATATGGAAATTACGATGGCAAAGACTCTCTTCCTGAATTTGATATCTATCTTGGAGCCAAATGGTGGGGATCTGTGGTATTTGAGGATGCATCGAGTGTAATCACCAAGGAAATCATTTATGCTGCTTCATCAGATTATGTTCATGTTTGTTTATTCAACACCCAGAAGGGTACACCTTTTATTTCAGTTTTAGAGCTTAGAGTTCTCAACAGCGATGCCTATCTAGTTAACTCTCTGGAGCTATTGGCACGGTTTGATGTAGGCTTAAAGGATGGTGAAATAATCAGACATCCAGAGGATTTCTATGATAGAATGTGGACACCTTATAACTCAATTGACTGGAAACAGATAGATACCACCCTCACCATAGACCACGGAGCTTCTTCATTCAATTTTTTACCATTGCCACCCTCCATTGTCATGGGAACTGCAGCAATTCCAGCAAATGTCAGCCACAATATAGAATTCCACTTTCTTCCTAAGTATAATAATAGTGCCTCTAGATACTATGTGTACATATTCTTTGCTGAAATCGAGAAACTCCAAGCAAATCAAATTAGAGAGTTCAACATTTTTGTAAATGGGAAGCTTCTAAATAATGCTCCAGTCAATCCTTCATACCTGCAGAGCCTGTATCATGTAGCAGCTATGAGTGAACCTCAGTTGGAACTATGGTTTAACAAAACTAGTAGATCAACTCTTCCTCCTCTTGTCAATGCCATTGAGATATATATGACAAAAGATCTCTCACAATCAGAAACATATCAAACTGATGTTGATGCTATCTTAGATGTAAAGTCAATTTATGGGATCAAGAGAAACTGGCAAGGAGATCCTTGTGCTCCACTGGCTTACTTGTGGGATGGTCTTAACTGCAGCTATGCTGGATCTGGTTCACCAAGGATTGTATACTTGAACTTATCTTCCAGTGGTTTAATAGGAAAAATAGCTCTTGGCATATCTAATATGAAGTCCATAGAGTATTTGGATTTGTCAAACAATAGCTTGACTGGAGATGTGCCAGATTTCCTTTCGCAACTGCGCTTCTTAAGAGTTTTAAACCTAGAAGGAAATCAGCTGTCAGGAACAATTCCAATGCAACTCGATGTGCGTTCAAATAATGGTTTGCTTGAATTCAATTTTGGTGGAAATCCAAATCTTTGCTCCCTAGGTTCATGCAACAACAGGAATGGAAATCAGGTTGTAATTCCACTGGTGTCATCGCTTGGTGGAGCTTTCATGATACTAATAGTATCAATGATTTCTTTCTGCGTATACAAAAGGAGACAACAAGTTTCTCCTCATATTAGCAAGAAGAGTGCATATTCCAGAATAAGGGAGGAACTAGAGTCAAATAAGCAAGAATTCACTTATGATGAAGTCTTGATAATTACTAGAAATTTTGAAAGGGTTGTGGGAAAAGGAGGATTTGCAACAGTCTACTATGGCTGTGTAGATGATACTGAAGTAGCTGTCAAAATGCTCTCTCCCTCAGCTCCAGCATATCTGCAATTTCATGCAGAGGCCAAACTTCTTGCGATAGTTCATCATAAATGCTTGACTGCTCTTATAGGATATTGTGATGATGGCGCCAATATGGCTCTCATCTATGAGTACATGGCTAATGGAGATTTGGCAAAGCATTTATCAGATAAAAACGAAAATACATTGAGTTGGAACCAACGAATTCAGATTGCAGTGGATGCTGCAGAAGGATTGGAGTATCTGCATCATGGCTGCAATCCACCGATTGTTCACAGAGATGTTAAATCTAAAAACATCTTATTGAATGAGAAACTCAGAGCTAAACTTGCTGATTTTGGGTTGTCCAAGATCTACCCCGATGAAGGTGACACCCATATGTCCACAGTGGTTGCTGGCACCCCTGGTTATCTTGACCCAGAGTACAATAGATTAAACAGGTTGAATGAAAAAAGTGATGTTTTCAGTTTTGGTGTAGTTTTGCTTGAGTTAATTACAGGCCAATATGCTATAATCAAAACCCAAGAGAAAACTCACATAATTCAATGGGTTGGTTCCATGAAGCCTGAAAGGGAGATCAATGATATTGTGGATTCAAGATTACAAGGAGAATTTGATATTGATTCTGCAAAGAAGGCCTTAGACACTGCAATGGCTTGTGTAGCTTCCACTTCCATTAATAGGCCAACCATGAGCCATGTAGTTAAGGAACTCAAACAATGTTTGGCAGAAAAAGTGACTTATCCTTCTGAATCTGGCAATCATGAGAGTTTACCCAACAGTTTAATCACTGTCTCCTTTGATAGAATTAGTGGAGAGAGTTCTTTAGAAAGATAG 2649 0.3881 MAGLNFLLLMFLLSLTLLIIVHAQSQSDFISIDCGLDEPSYTDGTAFIYYTSDVNFTSNGVSHSISPKYEALLDKQFWNVRSFPEGTRNCYTLVVPQGSNKKYLVRARFAYGNYDGKDSLPEFDIYLGAKWWGSVVFEDASSVITKEIIYAASSDYVHVCLFNTQKGTPFISVLELRVLNSDAYLVNSLELLARFDVGLKDGEIIRHPEDFYDRMWTPYNSIDWKQIDTTLTIDHGASSFNFLPLPPSIVMGTAAIPANVSHNIEFHFLPKYNNSASRYYVYIFFAEIEKLQANQIREFNIFVNGKLLNNAPVNPSYLQSLYHVAAMSEPQLELWFNKTSRSTLPPLVNAIEIYMTKDLSQSETYQTDVDAILDVKSIYGIKRNWQGDPCAPLAYLWDGLNCSYAGSGSPRIVYLNLSSSGLIGKIALGISNMKSIEYLDLSNNSLTGDVPDFLSQLRFLRVLNLEGNQLSGTIPMQLDVRSNNGLLEFNFGGNPNLCSLGSCNNRNGNQVVIPLVSSLGGAFMILIVSMISFCVYKRRQQVSPHISKKSAYSRIREELESNKQEFTYDEVLIITRNFERVVGKGGFATVYYGCVDDTEVAVKMLSPSAPAYLQFHAEAKLLAIVHHKCLTALIGYCDDGANMALIYEYMANGDLAKHLSDKNENTLSWNQRIQIAVDAAEGLEYLHHGCNPPIVHRDVKSKNILLNEKLRAKLADFGLSKIYPDEGDTHMSTVVAGTPGYLDPEYNRLNRLNEKSDVFSFGVVLLELITGQYAIIKTQEKTHIIQWVGSMKPEREINDIVDSRLQGEFDIDSAKKALDTAMACVASTSINRPTMSHVVKELKQCLAEKVTYPSESGNHESLPNSLITVSFDRISGESSLER* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2460 882 Pfam Malectin-like domain 32 355 IPR024788 -
Apr2g2460 882 CDD STKc_IRAK 582 844 - -
Apr2g2460 882 Gene3D Phosphorylase Kinase; domain 1 549 649 - -
Apr2g2460 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Apr2g2460 882 Gene3D Transferase(Phosphotransferase) domain 1 650 861 - -
Apr2g2460 882 PANTHER OS07G0107800 PROTEIN-RELATED 11 882 - -
Apr2g2460 882 SUPERFAMILY L domain-like 373 507 - -
Apr2g2460 882 Pfam Leucine rich repeat 411 470 IPR001611 GO:0005515
Apr2g2460 882 ProSitePatterns Protein kinases ATP-binding region signature. 582 603 IPR017441 GO:0005524
Apr2g2460 882 SMART serkin_6 576 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2460 882 PANTHER TYROSINE KINASE FAMILY PROTEIN 11 882 - -
Apr2g2460 882 Gene3D Ribonuclease Inhibitor 369 488 IPR032675 -
Apr2g2460 882 SUPERFAMILY Protein kinase-like (PK-like) 559 842 IPR011009 -
Apr2g2460 882 Pfam Protein tyrosine and serine/threonine kinase 578 842 IPR001245 GO:0004672|GO:0006468
Apr2g2460 882 ProSiteProfiles Protein kinase domain profile. 576 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2460 Apr-Chr2 29043915 29049215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2460 1 848 Receptor kinase-like Gene Family AT2G19210 47.746 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Apr2g2460 Malectin_like 2.3e-95 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2460 - - gmx:100778537 1406.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2460 2 29043915 29049215 Apr2g2460 2 29043915 29049215 ECH
Apr2g2461 2 29050111 29057443 Apr2g2460 2 29043915 29049215 PCT