Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2447 ATGAGTCGAGAACAACAGAAGCGAGGGAAGCAAGAAAAGGGTTCGGATGGTGCTGAGAAGGTTATTGTTGCCGTTAAGGCATCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCCCTAACTCATGTTGTGCAACCTGGGGATTGCATTACATTGCTAGTGGTTGTACCTTCACAGAGTTCAGGCCGAAGATTATGGGGTTTTCCACGGTTTGCTGGTGACTGTGCCAGTGGTCAAAAGAAGTCTACTCCAGGAACAAGTTCAGAACAGAAAAGTGATATTACTGATTCATGCTCTCAAATGATCCTTCAGCTCCATGATGTCTATGATCCTAATAAGATAAATGTGAGGATTAAAATTGTTTCTGGATCACCCTGTGGAGCAGTGGCTGCAGAAGCTAAGAAAGCCCAAGCCAATTGGGTTGTATTAGACAAACAGCTCAAACATGAGGAAAAACAATGCATGGAAGAGCTGCAGTGCAACATTGTGGTTATGAAGCGTTCCCAACCTAAGGTACTCCGCTTGAATTTGGTTGGATCACAAAAGAAAGATCTGGAAGAAGCATGTCCCTTAACTTCTGAGAAAGATGATGTGCCTGGAAAACAAACTAAAAAGAAGAACGATTCTTTAAATCCCATAAAAGGACCAGTTGTCACTCCAACTAGCAGCCCTGAGCTTGGTACACCGTTTACTGCTACTGAAGCTGGTACTTCATCAGTTTCAAGCTCCGATCCAGGAACTTCACCATTTTTTATCTCTGAGATGAATGCTGAGTCAAAGAAAGAGGAAACTATCAAAGAACATCAAGAACTTGATGATAATATTTCAGACACGGACAGTGAAAATTTGTCCACATCTTCAGCAAGCTTGAGATTTCAGCCATGGATCACGGATTTACTTTTGCATCAACGATCATCTGAACCTACAGAAGAAAGATTGGAGAGATCTCATAACAGGCTTCAATCATCTACAACTAGAGCTTTACTAGAGAAGTTCTCAAGACTGGACAGAGAAGCTGAAATTGAAAGCGCAACTTATAAGACTGACTTGGATTTCAGTGGAAATGTAAGAGAAGCAATATCATTATCTAGAAATAATCCACTTGGTCCACCTCCATTATGTTCAATCTGTCAACACAAGGCCCCTGTTTTTGGGAAACCTCCCAGATGGTTCAGCTATGCTGAGTTGGAGCTTGCCACTGGTGGATTTTCACAGGCCAATTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTTCCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTAGCTAGTTCTCAGGGTGATGTAGAATTTTGCTCAGAGGTAGAAGTCTTGAGCTGTGCCCAGCACCGAAATGTTGTTATGTTGATTGGGTTCTGTATAGAGGACAAGAGAAGGCTATTGGTTTATGAGTACATATGTAATGGATCGCTGGATTCTCATTTATATGGGAGACAGAGAGAACCATTAGAATGGTCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGGGGATTGCGATATCTTCATGAAGAGTGCAGAGTGGGTTGCATCATCCACCGCGACATGCGGCCAAACAACATTCTTATCACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACAGGAGTGGAAACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCGGAATATGCTCAAAGTGGCCAAATAACCGAAAAGGCCGATGTTTATTCCTTTGGTGTGGTATTAGTGGAACTGGTTACAGGACGAAAAGCTGTGGATCTCAATCGGCCAAAGGGACAACAGTGTCTTACTGAATGGGCACGGCCACTGTTAGAAGAATATGCCATTGAGGAACTCATCGATCCAAGGCTGGGAACTCACTATTCGGAACATGAGGTCTATTGCATGCTGCATGCTGCCTCATTATGCATAAGGCGTGATCCTTATTCTAGACCGCGCATGTCACAGGTTCTGCGAATTCTGGAGGGTGACACAGTGATGGACACAAATTACATGTCAACACCCACTTATGATGCAGGAAATGGGAGTGGTTGA 2091 0.4352 MSREQQKRGKQEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASGQKKSTPGTSSEQKSDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKQCMEELQCNIVVMKRSQPKVLRLNLVGSQKKDLEEACPLTSEKDDVPGKQTKKKNDSLNPIKGPVVTPTSSPELGTPFTATEAGTSSVSSSDPGTSPFFISEMNAESKKEETIKEHQELDDNISDTDSENLSTSSASLRFQPWITDLLLHQRSSEPTEERLERSHNRLQSSTTRALLEKFSRLDREAEIESATYKTDLDFSGNVREAISLSRNNPLGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQREPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIEELIDPRLGTHYSEHEVYCMLHAASLCIRRDPYSRPRMSQVLRILEGDTVMDTNYMSTPTYDAGNGSG* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2447 696 MobiDBLite consensus disorder prediction 190 208 - -
Apr2g2447 696 CDD USP_Like 20 143 - -
Apr2g2447 696 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 694 - -
Apr2g2447 696 MobiDBLite consensus disorder prediction 214 250 - -
Apr2g2447 696 SUPERFAMILY Protein kinase-like (PK-like) 387 681 IPR011009 -
Apr2g2447 696 Coils Coil 254 281 - -
Apr2g2447 696 MobiDBLite consensus disorder prediction 190 250 - -
Apr2g2447 696 Gene3D Transferase(Phosphotransferase) domain 1 479 686 - -
Apr2g2447 696 Pfam Protein tyrosine and serine/threonine kinase 407 672 IPR001245 GO:0004672|GO:0006468
Apr2g2447 696 CDD STKc_IRAK 409 675 - -
Apr2g2447 696 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Apr2g2447 696 ProSiteProfiles Protein kinase domain profile. 403 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2447 696 PANTHER OS01G0253100 PROTEIN 16 694 IPR045271 GO:0004714|GO:0006468
Apr2g2447 696 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2447 Apr-Chr2 28952216 28957916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2447 383 692 Trihelix Transcription Factor Family AT1G70460 51.250 2.43e-102 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Apr2g2447 PK_Tyr_Ser-Thr 7.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2447 - - gmx:100789216 1302.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2447 2 28952216 28957916 Apr2g2447 2 28952216 28957916 ECH
Apr2g2447 2 28952216 28957916 Apr2g2447 2 28952216 28957916 PCT