Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2443 ATGGGTGTGGAAGAAAAGCCTAAGCTCATTCATGGAACAGTTGAAGCTACTATTTTCAATGCCACGCCTTACTCACCTTCATTTCCCTTCAATTGTATAGGTAAATATGGAAAACCTGCTTATGTGACCATCAAGATAGACAACAAAAAGGTGGCAAAAACAGCCCAAGAACGTGAACGCGTTTGGAACCAAACCTTTCAGATTCAGTGTGCGCATCCATCTGATTCAACAATCACCATTATGATGAAAACATCGTGCTCCATATTGGGTAAATTCCATATCCAGGCCAAGCAGTTGAAGGAAGAGAGTTTGATCAATGGATTCTTCCCTCTTCTCATGGAAAATGGAAAACCAAACCCACAACTAAAATTAAGGTTTATATTATGGTTCAAGCCAGCATATTTGGAACCAAGTTGGGCAAAGATACTGAGCAATGGGGAATTTCAAGGGCTGAGGGATGCAACATTCCCACAAAGGTCTAATTGCCAGGTTCAGCTCTATCATGATGCTCACCATTCATCTGCTTTTCAACCTCCTTTTGATCTATGTGGAGCTCCAAGAAAGCTGTGGGAGGATGTTTATAAAGCCATTGAGGGTGCAAAATATTTAATTTATATTGCAGGCTGGTCTTTCAATCCTAAGATGGTTCTGGTTAGAGATCCTCAAACAGAAATCCCACATGCCAGGGAAATAAAGTTGGGCGAGCTATTGAAGAAAAAGGCAGAAGAAGGAGTGGCTGTGAGGGTTATGATTTGGGATGATGAAACATCTTTGCCTTTTATTAAGAACAAAGGTGTGATGAACACCCATGATGAGCATGCTTTTGCTTACTTCAAACACACAAAAGTGATATGCAGAAAGTGTCCAAGGTTACATCACAAGTTCCCCACACTCTTTGCTCACCATCAGAAAACCATAACTGTGGATACTAGAGTACCCAACTCTGTCAATGACAGAGAAATTATGAGCTTTTTGGGTGGTCTAGATTTGTGTGATGGCCGATATGACACTGAGCAACATTCATTGTTTCAAACACTTACTAAGGAATCACAATACCATGACTTCTACCAAACAAACATAGCTGGAGCTAGCCTCAACAAAGGAGGGCCAAGAGAACCTTGGCATGATGCTCATGCTTGCGTTACTGGTGAAGCTGCTTGGGATGTGTTAACTAATTTTGAGCAAAGATGGACAAAGCAATGTGATCCTTTTCTTCTAGTCCCTGCTAACACCTTACAAAATCTGATTCCCACATACTCGGGTACTCTCAAAGAGAGGAATTGGAAAGTTCAAGTATACAGGTCAATTGATCATGTGTCTTCTAGCCAGTTGTTTAGAAAGCTAAGTGTGGAGAGAAGCATCCACGATGCTTATGTTGAAGCTATTAGGCGTGCTGATAGGTTTTTGTACATCGAAAACCAATATTTCATTGGGGGATGCCATTTATGGCAGAATGATAGGCACAGTGGCTGCAGAAATCTGATTCCTGTTGAAATTGCACTCAAGGTGGTAAGTAAGATTAAAGCAAGAGAGAGGTTTGCAGTGTACATAGTCATACCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAACCAGTTCAAGATATACTGCATTGGACCAGAGAAACAATGACAATGATGTATAAGTTGATTGGAGAAGCTATAATGGAAAGTGGGCAGCCAGGGCATCCAAGAGACTACTTGAATTTCTTCTGCCTTGCAAATAGGGAAAATAAAGGAAAAGAGGAGTATCTTCCCCCACATTCTCCCCATCCTGAAACACAATACTGGAATGCACAAAAAAATAGGAGGTTCATGGTTTATGTTCACTCTAAGCTCATGATAGTGGATGACCTATACATATTAATAGGATCAGCCAATGTAAACCAAAGATCTATGGATGGGCAAAGGGACACTGAGATTGCCATAGGGGCCTACCAGTCTCAAGATGGAGCTGATCATCACATAAGCAGTGGTGATATTTGTGCATACAGAATGTCACTGTGGTATGAGCACGCAGGGAGTGCTGAGGAATTGTTCTTAGAGCCAGAGAGTTTGGCATGTGTGCAGAGAATGAGGTCAATAGGAGACCATATGTGGGAAATCTACAGTAGTGAAGAAATTGTGGACATGGAAGGGGTGCACCTTGTAACTTACCCTGTGAAAGTAACCCAAGAAGGGTCTGTGGAGGATCACAATGATGGTGGCAATTATTTTCCTGATACAAAATCTCCAGTGAAAGGGAAAAGATCTAAATTTTTAGCCCCTATCTTTACCACTTAA 2280 0.4154 MGVEEKPKLIHGTVEATIFNATPYSPSFPFNCIGKYGKPAYVTIKIDNKKVAKTAQERERVWNQTFQIQCAHPSDSTITIMMKTSCSILGKFHIQAKQLKEESLINGFFPLLMENGKPNPQLKLRFILWFKPAYLEPSWAKILSNGEFQGLRDATFPQRSNCQVQLYHDAHHSSAFQPPFDLCGAPRKLWEDVYKAIEGAKYLIYIAGWSFNPKMVLVRDPQTEIPHAREIKLGELLKKKAEEGVAVRVMIWDDETSLPFIKNKGVMNTHDEHAFAYFKHTKVICRKCPRLHHKFPTLFAHHQKTITVDTRVPNSVNDREIMSFLGGLDLCDGRYDTEQHSLFQTLTKESQYHDFYQTNIAGASLNKGGPREPWHDAHACVTGEAAWDVLTNFEQRWTKQCDPFLLVPANTLQNLIPTYSGTLKERNWKVQVYRSIDHVSSSQLFRKLSVERSIHDAYVEAIRRADRFLYIENQYFIGGCHLWQNDRHSGCRNLIPVEIALKVVSKIKARERFAVYIVIPMWPEGVPESEPVQDILHWTRETMTMMYKLIGEAIMESGQPGHPRDYLNFFCLANRENKGKEEYLPPHSPHPETQYWNAQKNRRFMVYVHSKLMIVDDLYILIGSANVNQRSMDGQRDTEIAIGAYQSQDGADHHISSGDICAYRMSLWYEHAGSAEELFLEPESLACVQRMRSIGDHMWEIYSSEEIVDMEGVHLVTYPVKVTQEGSVEDHNDGGNYFPDTKSPVKGKRSKFLAPIFTT* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2443 759 Pfam Phospholipase D C terminal 676 748 IPR024632 -
Apr2g2443 759 Gene3D Endonuclease Chain A 417 653 - -
Apr2g2443 759 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 604 631 IPR001736 GO:0003824
Apr2g2443 759 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 297 334 IPR001736 GO:0003824
Apr2g2443 759 SUPERFAMILY Phospholipase D/nuclease 146 407 - -
Apr2g2443 759 Pfam Phospholipase D Active site motif 607 631 IPR001736 GO:0003824
Apr2g2443 759 Pfam Phospholipase D Active site motif 298 334 IPR001736 GO:0003824
Apr2g2443 759 CDD PLDc_pPLD_like_2 450 648 - -
Apr2g2443 759 PANTHER PHOSPHOLIPASE D 6 759 IPR015679 -
Apr2g2443 759 SMART pld_4 604 631 IPR001736 GO:0003824
Apr2g2443 759 SMART pld_4 297 334 IPR001736 GO:0003824
Apr2g2443 759 PANTHER PHOSPHOLIPASE D ALPHA 6 759 - -
Apr2g2443 759 Pfam C2 domain 40 111 IPR000008 -
Apr2g2443 759 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 132 IPR035892 -
Apr2g2443 759 SUPERFAMILY Phospholipase D/nuclease 427 688 - -
Apr2g2443 759 Gene3D Endonuclease Chain A 176 415 - -
Apr2g2443 759 PIRSF PLD_plant 5 759 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2443 Apr-Chr2 28937520 28940316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2443 32 759 Phospholipase D Gene Family (Wang group) AT1G55180 63.747 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2443 K01115 - gmx:100807431 1414.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2443 2 28937520 28940316 Apr2g2443 2 28937520 28940316 ECH
Apr2g2443 2 28937520 28940316 Apr2g2443 2 28937520 28940316 PCT