Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2431 ATGGCAGCGAACGAATCAGAAGAATCACCGAAAAGGGTTCAATACCCACTAGACGCATCCTCATACAAGATCCTCAACGAGATCGGAGAAGGCACGAGCGCCCTAGTGTACAAAGCAATGTGCATTCCCATGAACTCCACCCTCGTAGCCATCAAATCCATAGACCTCGACCGTTCTCGCCCCGACTTGGACGACGTTCGCCGCGAAGCCAAAACCCTTTCCCTCCTTTCCCACCCAAACATCCTCAAAGCCCACTGTTCCTTCACCGTCCACCGCCGCCTCTGGGTAGTGATGCCCTTCATGGCCGCTGGTTCCTTACAATCCATCATTTCTCATTCCTTCCCTAATGGTTTAACCGAACCATGCATCGCTCTCGTTCTCAAAGACACTCTCAACGCTCTCTCTTACCTCCATGCCCAAGGCCATCTCCATAGAGACATCAAAGCCGGTAACATCCTCGTTGACTCCAATGGTCAAGTCAAACTTGCTGACTTTGGTGTCTCTGCTTCCATCTATGACTCCTCCTCCTCTTCTTCTCTAATGCTCACTGATCTTGCTGGCACGCCTTATTGGATGGCTCCCGAGGTGATTCACTCCCATACGGGCTACAGTTTCAAGGCTGATATATGGTCCTTTGGGATCACTGCTTTGGAGCTTGCTCATGGAAGACCTCCTCTCTCTCATCTTCCACCTTCCAAGTCTATGATGCTTAAGATCACTAAAAGGTTTCGTTTTTCTGATTTTGATAAGTACAGGAAGGGTAGTGGAAAGAAGTTCTCTAAGGCGTTTAAGGATATGGTTGCTTCTTGCCTCAATCAAGACCCTTCTAAGAGACCCTCTGCTGAGAAGCTTCTCAAGCACCCCTTCTTCAAAAACTGCAAGGGACCGGAGTTTCTGGTCAAGAACGTGCTTCAAGGGTTGCCCAGTGTTGAAAAGAGGTATAAGGAAAGCAAGGTTAATGTTCGTGCTGATGGTGATGGTGATGATGACGACAATGATGATGATGATATGCAGCGAAACGTGGTGAAACAGAGAAGGATCAGTGGGTGGAACTTCAATGAGGAAGGGTTGGAACTTGACCCCGTGTTTCCAAACGACGATGCGTCGGTGAAAGAGGTTCGGTTTGGAGGGGAAACGGTTATCCAAGAAATGGGGGGTTCAGAAGAGAAAGTGAAGAACAGGGAAGGGATGTTGGGGACTCTGAATGTGTTGAAAGGAAGCTTGGAACAAGAGCTGTGGCAAGTGAGGTTTCTGATGAATGCAATAAGGGGAGAGGGAGAAGAGACTCAGACTGGGGATCATAGCGAGGAGCAAATGGCGCATGAGATTCCAATGCTTAGGGCTGAATTGGAAAATGAGAGGAAAAAAAACTTGCAGTTGGAGTTGCAGATAGAGACCTACAAGCATCACCTTTCTTCTTTTTCTAATTCTTCTCAATAA 1440 0.4792 MAANESEESPKRVQYPLDASSYKILNEIGEGTSALVYKAMCIPMNSTLVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVHRRLWVVMPFMAAGSLQSIISHSFPNGLTEPCIALVLKDTLNALSYLHAQGHLHRDIKAGNILVDSNGQVKLADFGVSASIYDSSSSSSLMLTDLAGTPYWMAPEVIHSHTGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLKITKRFRFSDFDKYRKGSGKKFSKAFKDMVASCLNQDPSKRPSAEKLLKHPFFKNCKGPEFLVKNVLQGLPSVEKRYKESKVNVRADGDGDDDDNDDDDMQRNVVKQRRISGWNFNEEGLELDPVFPNDDASVKEVRFGGETVIQEMGGSEEKVKNREGMLGTLNVLKGSLEQELWQVRFLMNAIRGEGEETQTGDHSEEQMAHEIPMLRAELENERKKNLQLELQIETYKHHLSSFSNSSQ* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2431 479 Pfam Protein kinase domain 22 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2431 479 ProSiteProfiles Protein kinase domain profile. 22 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2431 479 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 6 473 - -
Apr2g2431 479 SMART serkin_6 22 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2431 479 Gene3D Phosphorylase Kinase; domain 1 11 100 - -
Apr2g2431 479 SUPERFAMILY Protein kinase-like (PK-like) 13 297 IPR011009 -
Apr2g2431 479 Coils Coil 443 470 - -
Apr2g2431 479 Gene3D Transferase(Phosphotransferase) domain 1 104 340 - -
Apr2g2431 479 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 473 - -
Apr2g2431 479 ProSitePatterns Protein kinases ATP-binding region signature. 28 52 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2431 Apr-Chr2 28853003 28854508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2431 12 459 MAP Kinase Kinase Kinase Kinase AT4G14480 56.442 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Apr2g2431 Pkinase 9.8e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2431 K08835 - gmx:100820227 717.613