Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2430 ATGGAAAGCAACCTATCAAGAAGCTACAACACACAAGCTTGCGCTGCATGTAAATTTCAACGCAAAAAGTGTGGCACTAATTGCATTCTCGCACCTTATTTTCCTCACGATCGTCAAAACCAATTTCTCAACGCGCACAGATTATTTGGCGTTGGTAGAATCACCAATATGCTGAAGATTCTTGATCCTCAACACAGAGATATTGCTGCGAACACCATTATTTACCAATCTGACATGCGCGCCAAAGATCCTGCTGGCGGTTGTTACAGACAAATTCACCAGTTGCAGTCACAGATTGAGTACACCGAAGCCGAACTTCACCTTATTCTTCAACATCTTGCTTTTCTCAAGGCTAGCTCTCGTGACATCATCAATGGCGTCTCTCAACCTTATCTTGAATCAATGCCACAAGATCATCAACAACACGTCAGTTATAATCCTTCACATGAAGACATCAACATGGGGGTTTTACAGAACTCTATTCCTTTGTCTCATTCGTCTTTAGAAGATAACCAAGAACCTGTTGTCGATTTTAGGTACGATGATCAAAAGCCTGTTCTTGACTTCATGAACAAAATGAATTCGGATCTTGGATCTCATCATTAG 606 0.4125 MESNLSRSYNTQACAACKFQRKKCGTNCILAPYFPHDRQNQFLNAHRLFGVGRITNMLKILDPQHRDIAANTIIYQSDMRAKDPAGGCYRQIHQLQSQIEYTEAELHLILQHLAFLKASSRDIINGVSQPYLESMPQDHQQHVSYNPSHEDINMGVLQNSIPLSHSSLEDNQEPVVDFRYDDQKPVLDFMNKMNSDLGSHH* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2430 201 Pfam Lateral organ boundaries (LOB) domain 13 108 IPR004883 -
Apr2g2430 201 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Apr2g2430 201 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 196 - -
Apr2g2430 201 PANTHER LOB DOMAIN PROTEIN 10 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2430 Apr-Chr2 28851670 28852275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2430 12 117 AS2 family AT3G13850 60.377 1.23e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr2g2430 LOB 3.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2430 - - ccaj:114916407 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2430 2 28851670 28852275 Apr2g2430 2 28851670 28852275 PCT