Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2418 ATGGGTGCTTCGGGAAGATGGTTTAAATCACTTCTTTCTCTCCGAAAGACCTCAACTTCAACTACTGATCAAGAGAAGAGTAGTGAGAACAAGAGTAAGAAGAAGTGGAAGCTATGGAAGAATTCTTCAGAAGGGTCAATGAAGAAAGGAGGCGGTGGTGCTGTGTCTGGTTCTTCGCTTTCTTCTGCGGTGGCTGTGGTCGTTCGAGCTCCACCAAAAGATTTCATGGTCATCAAACAGGAATGGGCTGCCATATGCATTCAGGCTGTGTTTCGAGCCTTCTTGGCTAGACGAGCTTTGAGGGCCTTGAGGGCAGTGGTAAAGCTTCAAGCTACTTTTCGAGGTAGGCAAGTCAGAAAGCAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTTCGAGTTCAGGCACGTGTAAGGGCAAGGAATGTGAGGAAATCCCCTCAAGGGAAAGCGGTGCAGAAATTGTTAGATGAGCACCGCAACCAAGCCGATCCTGTTAAGCAGGTTGAGCAAGGATGGTGTGACATTCCTGGAACTGTTGATGAAGTTAAAACAAAGCTACGAATGAGGCAAGAAGGAGCCATCAAGAGGGATAGAGCAATGGCATACTCCCTCTCCACACAGTCAAGAGTGAGTGCCAGTCCAAACTCTAGAACCACCAAGGCAGAGATTCCTCTCAAGCATCACAACCTAAACAATAAGAGCTTAGGATGTAGCTTGTTAGAACGCTGGATGGAGGCAAAGCCATGGGAGAGTCCAATCTCAAGGAAGAGTGAAGAAATTGTTCCTCACTTTCAATCAAGAAGGAATGGTGTGACAACTAGGATTTCAGTTGTTAAATCTCTTACAACCAGTCAATTTTCAACCATAAGCTCTGAATACATGTCTGATGATAGCCCTGTGTCTACTTCATATACATCTGGATCTTCATCTTTTCCATCCACCACTACTGCTGTGGTGGAAGCAACAAAGGAAAGAGATGTTAATCAACCAAGCTACATGAATTTGACAGAATCAACTAAGGCTAAACTGAAAGCTTGCAGGTCCTCTTCACAAAATTCAAAGAGACTTGTGATGGAGCATTGTCTGTCTCATAGCTCAACAACAGGATTTCTGAATGGAGATACTAGAAGCAATTCTGGCTCTGATCCTTCAGTTAATTTATGGAAGGATCTTTGTGCAACACCTCTAAGGGCAAGTTATCAAAAATGA 1215 0.4444 MGASGRWFKSLLSLRKTSTSTTDQEKSSENKSKKKWKLWKNSSEGSMKKGGGGAVSGSSLSSAVAVVVRAPPKDFMVIKQEWAAICIQAVFRAFLARRALRALRAVVKLQATFRGRQVRKQAAVTLRCMQALVRVQARVRARNVRKSPQGKAVQKLLDEHRNQADPVKQVEQGWCDIPGTVDEVKTKLRMRQEGAIKRDRAMAYSLSTQSRVSASPNSRTTKAEIPLKHHNLNNKSLGCSLLERWMEAKPWESPISRKSEEIVPHFQSRRNGVTTRISVVKSLTTSQFSTISSEYMSDDSPVSTSYTSGSSSFPSTTTAVVEATKERDVNQPSYMNLTESTKAKLKACRSSSQNSKRLVMEHCLSHSSTTGFLNGDTRSNSGSDPSVNLWKDLCATPLRASYQK* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2418 404 MobiDBLite consensus disorder prediction 16 58 - -
Apr2g2418 404 MobiDBLite consensus disorder prediction 26 42 - -
Apr2g2418 404 Pfam IQ calmodulin-binding motif 82 101 IPR000048 GO:0005515
Apr2g2418 404 Pfam IQ calmodulin-binding motif 104 121 IPR000048 GO:0005515
Apr2g2418 404 ProSiteProfiles IQ motif profile. 80 108 IPR000048 GO:0005515
Apr2g2418 404 PANTHER IQ-DOMAIN 5-RELATED 1 404 - -
Apr2g2418 404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 122 IPR027417 -
Apr2g2418 404 ProSiteProfiles IQ motif profile. 104 131 IPR000048 GO:0005515
Apr2g2418 404 Gene3D - 77 132 - -
Apr2g2418 404 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 404 - -
Apr2g2418 404 SMART iq_5 79 101 IPR000048 GO:0005515
Apr2g2418 404 SMART iq_5 102 123 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2418 Apr-Chr2 28785095 28787016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2418 1 393 IQD Protein Family AT1G72670 45.070 2.13e-91 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2418 - - gmx:100788715 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2418 2 28785095 28787016 Apr10g1011 10 22547515 22549847 PCT