Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2415 ATGGACCACCACAAAGAGAGAATAAGGAGTGGGTGCCAGAAGATTCTAGAAGGAATAAATTCAATGTCATTGGTAAATTTAGATGACCAGCAAGTTCATTCCTTAGTGATGATGAGAGAGATAGCACGTGGGGTTGTTGATGATCGAGATAGAAAGGTGACCAAGAATGATGTGATTACTGCCTTGCGCTACAGCATTGAGAAAATGGTGTGTGCGTCCAGGGATATCATTCAAATATTTAGTAGGATGTCCTTTGAAGGATTGGATGACCAGAGGATGCATTTAGTCATGAGGATGAAAGAAATCGCGCATGGGATTATTGATAAACAACCTAGAGTTACAATAACTAGGCCTGACTTACTTGAAGAACAAGTTGGCTTTGTGGATGAAGGGGTGAGAGATAGTGCCATGGTTGAGTCAACTAAGATTAGCAATGGGGATGCCCTGATTGATGGGGCACAAAGTATGACAAATGAAGATGAGATATTGGACATGGAACATGTTTTAAGATTTGAAAATGGGATAGATGAAGTACAGGAGTCTCTGTTACCACCATGCTTTCAGCAACTTCTTATGTGGCCCCCTGATGATTGTGTCACCATAGAGTGGGTTCAGGACATGATGTTCATGCTTGAGCAGGTTTCACGGAAGATGTTGCCATCTGGATTCTGTCATGTTGTGCCAACCATGTTGGTGGAGAAATTGACAGATGCTGCTTGCAGTATTTTATGTAAAGAACCAAACTGTGTGGAGGTTAATTGTCTAGGAGAAGACTCAAGAGTCATTGTAGTAGGTGGTATACATGGGCAGTTTCATGATTTAATGTTTCTAATGAAGCATGCAGGAGTGCCCTCTGAGAACCAGATTTATGTTTTCAATGGAAATTATGTAGATAATGGAGCATGGGGAATTGAAGTATTATTGGTCTTACTGGCTTGGAAGGTCTTGATGCCTCATAGAGTATATCTACTTCGTGGAAATCATGAATCAAGATATTGTACTGCAAGATATGGTTTTAAGAAAGAGGTATCGACCAAATATGGTGATCAAGGTGAAGATGTCTACAACAAATTCCTAGAGTGTTTCAAGGAGCTTCCATTAGCTTCAGTTATTGCCAACTGCGTTTATATTACTCATGGAGGGCTTTTCCGTAGCATATATGCAACCCCTTCACACAAATCGAAATGGAAGAAGACACAGAACATGGATCTTGGTTCCTTAACTGAGTTATCTGAAGTTAAAAGAACTTATGTAGATTCCCCTTATGAAGGTCCTAACATATTATTGAGTGACGTTGTGTGGTCAAAACCATCTGACATGGATGGTCTGAGGGATAATTCAGGTCAAAAATTTGGTTTATGGTGGGGTCCTGATTGCACTGAGGCATTCTTAAAGCAGCATAATTTAAAGCTGATTATCAGATCACATGAAGGACCTGATGCAAGGGCTGGTAGAGATGCTTTTGGGGATATGTTGAGTGGATACAGCTTAGATCATGATGGAGAATCGGGAAAACTATATACACTTTTTAGTGCTCCAGATTACCCACAGTTTGGTAAAAGGAGATATTACAATGAGGGGGCATATGCAGTGTTGAAGTCGCCTGATTTTGCTAAACCATCCTTTCACTCGTTCAAATCAGCAGAAAGACCGACGGTGGATCCTTATGTTGATTTAGATGCTAATGACATGGACTCGAGTAAACTAGACTCTTCTCAAAGTGCCTCAACCTCTGCCTTTTCTGCACCTGAAAGATTTTATCCAGATGGGATCATGAGACCCGAGTTTGACTTTGGGGCATTAGGCATATATAATGCTCCATGTTGGAGTGTTCAGCTACCTGATGGTTCAGGTGGTACTCACGTTGTGGAGGTTCCAAGGGCTCCATTGGTGGAAGGATTGCCTCTGCCTTCCAATATTCAGGAGCCACACAAGGCAGCTTATGAATATTTGTTTGAGTTAGTTGCAGCCCTGAAACATATGATTGTATCAAGGGAGACTCAGAACAGGGCCCGTGTGTCAGCTTTGAGAAGTAGAGCTAGGAAACGAAAGGGTAGGGGTAACTCATGA 2070 0.4164 MDHHKERIRSGCQKILEGINSMSLVNLDDQQVHSLVMMREIARGVVDDRDRKVTKNDVITALRYSIEKMVCASRDIIQIFSRMSFEGLDDQRMHLVMRMKEIAHGIIDKQPRVTITRPDLLEEQVGFVDEGVRDSAMVESTKISNGDALIDGAQSMTNEDEILDMEHVLRFENGIDEVQESLLPPCFQQLLMWPPDDCVTIEWVQDMMFMLEQVSRKMLPSGFCHVVPTMLVEKLTDAACSILCKEPNCVEVNCLGEDSRVIVVGGIHGQFHDLMFLMKHAGVPSENQIYVFNGNYVDNGAWGIEVLLVLLAWKVLMPHRVYLLRGNHESRYCTARYGFKKEVSTKYGDQGEDVYNKFLECFKELPLASVIANCVYITHGGLFRSIYATPSHKSKWKKTQNMDLGSLTELSEVKRTYVDSPYEGPNILLSDVVWSKPSDMDGLRDNSGQKFGLWWGPDCTEAFLKQHNLKLIIRSHEGPDARAGRDAFGDMLSGYSLDHDGESGKLYTLFSAPDYPQFGKRRYYNEGAYAVLKSPDFAKPSFHSFKSAERPTVDPYVDLDANDMDSSKLDSSQSASTSAFSAPERFYPDGIMRPEFDFGALGIYNAPCWSVQLPDGSGGTHVVEVPRAPLVEGLPLPSNIQEPHKAAYEYLFELVAALKHMIVSRETQNRARVSALRSRARKRKGRGNS* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2415 689 SUPERFAMILY Metallo-dependent phosphatases 222 554 IPR029052 -
Apr2g2415 689 ProSitePatterns Serine/threonine specific protein phosphatases signature. 324 329 IPR006186 GO:0016787
Apr2g2415 689 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 4 674 - -
Apr2g2415 689 PRINTS Serine/threonine phosphatase family signature 260 287 IPR006186 GO:0016787
Apr2g2415 689 PRINTS Serine/threonine phosphatase family signature 290 317 IPR006186 GO:0016787
Apr2g2415 689 PRINTS Serine/threonine phosphatase family signature 323 347 IPR006186 GO:0016787
Apr2g2415 689 PRINTS Serine/threonine phosphatase family signature 360 386 IPR006186 GO:0016787
Apr2g2415 689 PRINTS Serine/threonine phosphatase family signature 505 521 IPR006186 GO:0016787
Apr2g2415 689 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 4 674 - -
Apr2g2415 689 SMART pp2a_7 227 549 IPR006186 GO:0016787
Apr2g2415 689 Pfam Calcineurin-like phosphoesterase 260 479 IPR004843 GO:0016787
Apr2g2415 689 Gene3D - 198 582 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2415 Apr-Chr2 28761298 28766930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2415 191 471 Calmodulin-binding Proteins AT5G63870 50.515 2.20e-94 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2415 K04460 - gmx:100779241 918.687