Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2414 ATGGCACGGGGGAGGATCAGGGCAAAGCTCCGCAGGAGCAATCTTTACACATTTGGATGCCTTCGGCCAACTACCTCTGAGGAGGTGCCTCATCCACTTCAAGGTCCAGGCTATTCGCGAACTGTGTATTGCAACCAGCCTCAACTCCATGAAAAGAAATCTCTATTTTACTGCAGGAATGATATATCCACAACCAAATACAATGTTATCACTTTTCTGCCCAAGGCGCTGTTTGAACAATTTCGAAGGGTGGCTAATATATACTTCCTCTTAGCTGCTTGTCTCTCGGCCTCTCCAATTTCACCTTTCAGCCCAGTGAGCATGATTGCTCCTTTGGTGTTTGTTGTGGGGCTTAGTATGGCCAAGGAAGCATTGGAGGATTCGCGCAGGTTCCTTCAGGATGTCAAAGTCAACCGCCGGAAAGTTAGTCTGCATAAAGGCAATGGCATTTTTGGTCTCGGGTCGTGGCAGAAAATTATGGTTGGGGATGTCGTGAAAGTTGAGAAGGACCAATTTTTTCCGGCCGACTTGCTTCTCTTGTCATCAAGTTATGAGGATGGAATATGCTATGTGGAGACAATGAATTTAGATGGCGAGACCAACTTGAAGGTGAAGAGATCTTTGGAGGCTACCTTGTCTCTGGATAATGATGGAGCTTTCAAGGATTTCTCTGGAACAATACGTTGCGAAGACCCAAATCCATATCTTTACACTTTTGTTGGTAACTTTGAGTATGGAAGTCAGGTTTATCCTCTTGATCCTGGTCAAATTCTCCTCCGAGATTCAAAGCTTAGGAACACTGATTTTGTCTACGGGGTGGTCATTTTCACTGGTCATGACAGCAAAGTCATGCAGAATTCTACAAAATCCCCGTCAAAAAGAAGCACAATAGAAAAAAAGATGGATTACATCATATACACTCTTTTCACTGTCCTTATATTGATATCTTTTATTAGTTCAATTGGATTTGTTGCAAAGACTAAATATCAAACCACGAAGTGGTGGTATTTATGGCCTGACAATATTGAATATCAGTATGATCCTAAGAAAATTGGATTGGCTGGGATGAGCCATCTAATTACTGCACTCATTTTATATGGATATTTGATACCCATCTCGCTTTATGTTTCAATCGAGGTTGTCAAGGTATTACAGGCAACCTTCATTAACCAAGACATTCAAATGTATGATGACGAGACGGGGACTCCAGCTGAGGCAAGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACTATCCTCTCTGATAAAACTGGCACTTTGACCTGCAACCAGATGGACTTTTTGAAGTGCTCCATTGCTGGTACTGCATATGGGGTGCGTTCCAGTGAAGTTGAGGTTGCTGCAGCAAAGCAGATGGCTTCTGATCTTGAGGAGCAGGAATTGGATCCCTCCAATTTCCCCGGTCAAAAGGAGATTAAAGTGCCACGGGAAAATATCAGAAAAGATGAAGAAATTGCACTGGAGACTGTTGTTACTTCCAAGTATGATGAGGATCGAAGGCCTTCCATGAAGGGATTTGGTTTTGAAGACAACCGCCTTATGAATGGTAACTGGTTGAAAGAGCCCAATGCTGATGTTCTTTTGTTGTTTTTCCGGATATTATCAGTTTGCCATACTGCAATTCCTGAGCTGAATGAGGAGACTGACAGTTGTACATATGAAGCTGAATCACCTGATGAAGGGGCTTTTCTTGTAGCAGCTAGAGAATTTGGTTTTGAATTTTATAGAAGAACTCAATCAACTGTTGTCATACGTGAAAGATTTTCTGCTTCAGGACAAGTGGTTGAAAGAGAGTATAAAATCTTGAATCTGCTGGATTTTACTAGCAAGAGAAAGCGTATGTCAGTGATTGTGCGTGATGAGGAGGGAAGCATTATTCTTTTCTGCAAAGGAGCTGACAGTATCATATTTGATCGGCTGTCCAAGAATGGAAAAATGTATCTAGAGGCTACTACTAGACATTTGAATGAATATGGAGAAGCTGGTTTGAGAACATTAGCTCTGGCTTACAGAAAGCTTGCTGACCAAGAGTACTCTGATTGGAATAACGAATTTCAGAAAGCCAGAACAGCTGTTGGGCCTGACAGAGAGGCAATGCTTGAGCAAGTTTCAGATATTATGGAAAGAGAGTTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAACTGCAGAAAGGGGTGCCTCAATGCATTGATAAACTTGCTCAAGCTGGTCTAAAGATCTGGGTATTGACTGGGGATAAGATGGAAACTGCCATCAACATTGGATTTGCTTGTAGTTTGCTTCGACAGGGCATGAAGCAAATCTGTATCACCATGATGAATTCAGATCCAGGAACCAACAACGATGTGAAAGAGGTCATCAAAGGCAACATCTTGAATCAAATCACCAATGCCTCACAAATGATTAAGTTGGAAAAGGATCCACATGCTGCATTTGCATTAATTATTGATGGGAAAACTCTAACGTATGCTTTAGAAGATGACGTCAAGCACCATTTTCTGGGATTGGCTGTTGGCTGTGCATCTGTTATTTGCTGTCGTGTGTCTCCAAAGCAAAAGGCTTTGGTAACAAGGTTAGTGAAAGAAGGAACTGGGAAGACCACTTTAGCCATTGGTGATGGTGCGAATGATGTTGGCATGATTCAAGAAGCTGACATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCTGTGATGGCTAGTGACTTTGCTATTGCTCAATTCCGGTTTTTGGAGCGGCTTCTGGTAGTCCATGGACATTGGTGTTACAAGAGAATTGCACAAATGATATGTTATTTCTTCTACAAAAATATAGCATTTGGCCTCACCATATTCTATTTTGAGGCCTTTGCGGGCTTCTCTGGTCAATCAGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTGCCAGTCATTTCTCTTGGAGTTTTCGAACAAGATGTTCCATCTGAAGTTTGCTTACAGTTTCCTGCACTGTACCAGCAAGGACCCAAAAACTTGTTCTTTGACTGGTCTCGAATCTTGGGATGGATGGGGAATGGCCTGTATTCCTCCCTCATCATCTTCTTCCTTGTTATCATTATATTCTATGATCAGGCATTCCGTGTAAATGGCCAGACTGCAGACATGGCTGCTGTTGGTACCACAATGTTCACTTGCATCATCTGGGCTGTCAATTGCCAGATTGCATTGACAATGAGTCATTTCACATGGATTCAACACCTCTTTGTGTGGGGCAGTATAACCACTTGGTACATCTTTCTCATATTATATGGCATGATTTCTCCCCAATATTCCAAGACTGCCTACCAAATATTGGTTGAGGTTCTTGCTCCTGCTCCTATTTATTGGACAGCAACTCTTTTAGTTACAGTCACATGCATTCTTCCTTATCTTGCCCACATATCCTTCCAAAGATGTTTTAATCCTATGGATCATCACATTATCCAAGAAATCAAGTACTACAAAAAGGACATTGAAGATCAACACATGTGGAAGAGGGAGCGGTCTAAAGCAAGGCAGGAAACAAAGATTGGATTCACAGCAAGAGTGGAAGCAAAGATCAGGCAGTTGAAAGGGAAGCTACAGAAGAAGCAGGCTTCACCGTTTGTTTTGTCCCCATCATGA 3675 0.4215 MARGRIRAKLRRSNLYTFGCLRPTTSEEVPHPLQGPGYSRTVYCNQPQLHEKKSLFYCRNDISTTKYNVITFLPKALFEQFRRVANIYFLLAACLSASPISPFSPVSMIAPLVFVVGLSMAKEALEDSRRFLQDVKVNRRKVSLHKGNGIFGLGSWQKIMVGDVVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEATLSLDNDGAFKDFSGTIRCEDPNPYLYTFVGNFEYGSQVYPLDPGQILLRDSKLRNTDFVYGVVIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISFISSIGFVAKTKYQTTKWWYLWPDNIEYQYDPKKIGLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDDETGTPAEARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVEVAAAKQMASDLEEQELDPSNFPGQKEIKVPRENIRKDEEIALETVVTSKYDEDRRPSMKGFGFEDNRLMNGNWLKEPNADVLLLFFRILSVCHTAIPELNEETDSCTYEAESPDEGAFLVAAREFGFEFYRRTQSTVVIRERFSASGQVVEREYKILNLLDFTSKRKRMSVIVRDEEGSIILFCKGADSIIFDRLSKNGKMYLEATTRHLNEYGEAGLRTLALAYRKLADQEYSDWNNEFQKARTAVGPDREAMLEQVSDIMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITMMNSDPGTNNDVKEVIKGNILNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDVKHHFLGLAVGCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFAGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWSRILGWMGNGLYSSLIIFFLVIIIFYDQAFRVNGQTADMAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFVWGSITTWYIFLILYGMISPQYSKTAYQILVEVLAPAPIYWTATLLVTVTCILPYLAHISFQRCFNPMDHHIIQEIKYYKKDIEDQHMWKRERSKARQETKIGFTARVEAKIRQLKGKLQKKQASPFVLSPS* 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2414 1224 CDD P-type_ATPase_APLT_Dnf-like 59 1034 - -
Apr2g2414 1224 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 848 962 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g2414 1224 Gene3D - 115 288 - -
Apr2g2414 1224 SFLD p-type atpase 404 932 IPR044492 -
Apr2g2414 1224 Pfam Cation transport ATPase (P-type) 546 650 - -
Apr2g2414 1224 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1153 IPR023298 -
Apr2g2414 1224 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 522 685 IPR023299 GO:0000166
Apr2g2414 1224 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Apr2g2414 1224 Gene3D - 419 431 IPR023214 -
Apr2g2414 1224 Gene3D - 719 921 IPR023214 -
Apr2g2414 1224 Coils Coil 1197 1217 - -
Apr2g2414 1224 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Apr2g2414 1224 SFLD C1.7: P-type atpase like 404 932 - -
Apr2g2414 1224 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1217 - -
Apr2g2414 1224 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Apr2g2414 1224 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Apr2g2414 1224 Gene3D - 552 698 IPR023299 GO:0000166
Apr2g2414 1224 Coils Coil 448 468 - -
Apr2g2414 1224 SUPERFAMILY Calcium ATPase, transduction domain A 148 286 IPR008250 -
Apr2g2414 1224 SUPERFAMILY HAD-like 417 936 IPR036412 -
Apr2g2414 1224 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1167 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Apr2g2414 1224 Pfam Phospholipid-translocating P-type ATPase C-terminal 909 1159 IPR032630 -
Apr2g2414 1224 Gene3D - 432 458 IPR023299 GO:0000166
Apr2g2414 1224 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2414 Apr-Chr2 28746259 28752933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2414 1 1217 Primary Pumps ATPases AT1G17500 75.452 0.0 1918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2414 K01530 - gmx:100778710 2238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2414 2 28746259 28752933 Apr2g2414 2 28746259 28752933 PCT