Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2408 ATGGATTCAAATGCAAAGGAAGAGTCCACCGTCGTCGCCATTGATAGCGACCGGAACAGCCAACACGCCGTCATGTGGGCTGTCGAACATCTTTTGACGAAGAAATCCTCTTGCACCCTCATTCATGTCCGAACTACTACCTTGTATCCTCATGATATTGATGCTACCCCTATACAAGGTCGTCCACCAACCCAGGAAGAATTGCACCAGTTTTTTCTTCCCTTTCGAGGATTTTGTGCACGAAAGGGGATAGTAGCAAAGGAGTTGATCTTGCATAACATTGACGTTCCAAATGCGCTGACTGAATACGTCACTTACAACTCTATCGGCAATATTGTTGTTGGTGCTCCCCGCTGGAATAATGCTCTTATAAGGAAATTTAAAGAGGTAGATGTGGCAACAAGCTTAGTCAGGTCCTTGCCAGAGTCTTGCATGGTGCATGTTATATCAAAAGGAAAAGTGCACAATATTCGACCTGCAGGTCGTTCTCAAAATGTTAGTATCACAGTAACAAAATCTATAAAAGACATTCTTAGTCCCAAGGCAAATTCTCGGTCCGAAGATTTAAAAAGAAAATCATTCAAGTATAGAATTTGGCAAGGCTCAAACAACGACGGGGTAAGTTCTGATCAAAACAAGGATGCAACCAATGGAGAAACTAATTCACCAAAATTATCGGATGAAAGCAGCTCCTCACAAAATTCATCGAATCGAAGTTCCCTCACAGGTGACACTTCAAGGGCACTTGGTTCTCAATTGAATGAGACGTCAAATGAAAATCAAGATGTTGTAGAGAATTCAAACACTTGTACTTGTAGGAGCAAATCTTCTAAACATTCACCTAAAGGCAATGAGATAGAAACGGGGAAATTAAAACTAGAACCGAAGAGTAAAACAAAGAAGTGTAATAGCTGCAAGGAAGCTGCAGCCGCAAAACAGAAGGCAATGGAGCTTGAAAAGTTTAGGCAAGAAGAAAGAAACGTAGAAAAAACTAGGCTCGCTGAAGAGGCTACATTGACCATGGAAGAGGTAGAGAGGCAGAAAATAAAGGGCCAGAAGGGAAAACAGATCGAAACAAGAGCCAAGCATGAGGAAGAAGAGAGGAACAGGGCATTAAATGCAACTGCACATAACAAAATTCAATTTAGAAGATACAATATTAAAGAAATTGAAGTTGCGACACATTACTTTGACAATGATCTCAAAATTGGTGAAGGTGGCTATGGACCTGTTTTTAAAGGGGTGCTTGATAACACTGTTGTTGCCATTAAGGCCGTTAGACCAGACCTAACCCAAGGAGAGAAGCAATTTCAACAAGAGGTTAATGTTTTAAGCACAATAAGGCATCCAAACATGGTTCAACTTCTAGGTGCATGCCCAGAGTACGGATGCCTTGTGTATGAGTACATGGAAAATGGGAGCTTAGAAGATCGCCTCTACCAGATAGATAACACACCACCAATTCCATGGAAAGTTAGATTCAAAATAGCATCAGAAATTGCCACTGGCCTTCTTTTCCTTCACCAAACAAAACCTGAGCCTGTGGTGCATCGTGACCTCAAGCCAGCAAACATTCTCTTGGACATGAACTATGTGAGCAAGATCACTGATGTGGGTTTGGCCAGGCTTGTTCCCCCTAATGTGGCTAACAAAACCACCCAATACCATAGAACAACTGCAGCTGGCACATTTTGCTACATTGATCCGGAGTATCAACAAACGGGTTTATTGGGTGTAAAATCAGATATATATTCACTAGGTGTATTGCTTCTACAGATTATTACTGGAAAGTCTCCAATGGGTGTGGCTCACTTGGTTGAGGAGGCTATAAGCAAAGGAAAATTTCCAGAGGTTCTTGATCCAAATGTCAAGGATTGGCCCATTGAAGAGACTTTATCATATGCTAGGTTGGCTTTGAAGTGTTGTGAGATGAGAAGACGCGATAGACCAGACCTTGGTTCTGTCATTTTGCCTCAGCTCATTCGACTCAGGAATCTGGGAGAAGCATCCACTCACACTCATATTGTCCCCTCCTTAAAGGTTAGTTAA 2049 0.4197 MDSNAKEESTVVAIDSDRNSQHAVMWAVEHLLTKKSSCTLIHVRTTTLYPHDIDATPIQGRPPTQEELHQFFLPFRGFCARKGIVAKELILHNIDVPNALTEYVTYNSIGNIVVGAPRWNNALIRKFKEVDVATSLVRSLPESCMVHVISKGKVHNIRPAGRSQNVSITVTKSIKDILSPKANSRSEDLKRKSFKYRIWQGSNNDGVSSDQNKDATNGETNSPKLSDESSSSQNSSNRSSLTGDTSRALGSQLNETSNENQDVVENSNTCTCRSKSSKHSPKGNEIETGKLKLEPKSKTKKCNSCKEAAAAKQKAMELEKFRQEERNVEKTRLAEEATLTMEEVERQKIKGQKGKQIETRAKHEEEERNRALNATAHNKIQFRRYNIKEIEVATHYFDNDLKIGEGGYGPVFKGVLDNTVVAIKAVRPDLTQGEKQFQQEVNVLSTIRHPNMVQLLGACPEYGCLVYEYMENGSLEDRLYQIDNTPPIPWKVRFKIASEIATGLLFLHQTKPEPVVHRDLKPANILLDMNYVSKITDVGLARLVPPNVANKTTQYHRTTAAGTFCYIDPEYQQTGLLGVKSDIYSLGVLLLQIITGKSPMGVAHLVEEAISKGKFPEVLDPNVKDWPIEETLSYARLALKCCEMRRRDRPDLGSVILPQLIRLRNLGEASTHTHIVPSLKVS* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2408 682 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 121 - -
Apr2g2408 682 SUPERFAMILY Protein kinase-like (PK-like) 379 655 IPR011009 -
Apr2g2408 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Apr2g2408 682 CDD STK_N 9 152 - -
Apr2g2408 682 PANTHER OS02G0152300 PROTEIN 9 672 - -
Apr2g2408 682 Gene3D Phosphorylase Kinase; domain 1 374 469 - -
Apr2g2408 682 SMART serkin_6 397 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2408 682 MobiDBLite consensus disorder prediction 200 294 - -
Apr2g2408 682 Pfam Protein kinase domain 400 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2408 682 MobiDBLite consensus disorder prediction 200 277 - -
Apr2g2408 682 MobiDBLite consensus disorder prediction 278 294 - -
Apr2g2408 682 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 9 672 - -
Apr2g2408 682 ProSiteProfiles Protein kinase domain profile. 397 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g2408 682 MobiDBLite consensus disorder prediction 344 369 - -
Apr2g2408 682 Gene3D Transferase(Phosphotransferase) domain 1 470 672 - -
Apr2g2408 682 Pfam Universal stress protein family 11 145 IPR006016 -
Apr2g2408 682 Coils Coil 311 347 - -
Apr2g2408 682 Gene3D HUPs 8 150 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2408 Apr-Chr2 28702994 28707046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2408 10 674 Receptor kinase-like Gene Family AT1G17540 44.429 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Apr2g2408 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2408 - - gmx:100814365 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2408 2 28702994 28707046 Apr2g2408 2 28702994 28707046 PCT