Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2396 ATGGGGAGAATGATGGGTGTGGCTTTCCCACTTGTAGCTCTTGCAGTGCTAAGCATGTGTCAAGGGATGGCAGAGGCAGCATTAAGACCTCCACCGCCGAACATGCATTTGCATTACTATAAGATCAACAATACATGCCGCTACGTGGAGCAGTATGTTCGGCACCAAGTGACCTTGTTTTATCAGCATGATAGAAGCATTGTTGCAAAGCTACTTCGAATGGTTTATTCTGACTGTTTTGTCACTGGATGTGACGCATCAATTCTGCTAGATGAAGGACCAAATCCAGAGAAAAAAGCACCACAAAACCAGGGGCTGGGAGGATTTGTGATCATTGACAAAATCAAAACTGTTCTGGAATCACGATGCCCTGGAATTGTCTCCTGTTCTGATATACTCCATCTCGCCACCAGGGATGCTGTTCATCTGGCAGGTGGACCAGGTTATCAGGTTATAACAGGAAGAAAGGATGGCATGCAATCAGATGCTGCATCAGTAGACCTGCCATCACCATCCATCTCACTGCAGGAAGCTCTAGCATATTTCGCATCGAGGGGCTTGGATGAAGTGGATTTGACGGCACTTTTAGGAGCACACACAATAGGCCGAACACATTGTAGGTATGTTGTTGATCGGCTGTACAACTTCAATGGCACTGGAAACGCAGACCCAAGCATGACTGCTACTTTATTAGAGACATTGAGAGAACTTTGTCCACCAAGAAGGAAGGGACAACCAGACCCACTGGTATACCTAAACCCAGAATCTGGATCAACTTACAACTTTACAGAATCATACTACAAAAGGGTCCTAGATGACCAGGCTATACTGGGAATTGATCAACAATTACGAAAAAGTAATGACACTGAACAGATCACCGAAGAATTTGCTGCTGGATTTAAAGACTTAAAGAAATCCTTTGCTGAGTCAATGTACCATATGGGGAATATCAGAGTTTTAACAGGCAAGCAAGGAGAGATACGTCGAAATTGTCGATACACAAATAAGGGCAACCCAAATTAG 1023 0.4428 MGRMMGVAFPLVALAVLSMCQGMAEAALRPPPPNMHLHYYKINNTCRYVEQYVRHQVTLFYQHDRSIVAKLLRMVYSDCFVTGCDASILLDEGPNPEKKAPQNQGLGGFVIIDKIKTVLESRCPGIVSCSDILHLATRDAVHLAGGPGYQVITGRKDGMQSDAASVDLPSPSISLQEALAYFASRGLDEVDLTALLGAHTIGRTHCRYVVDRLYNFNGTGNADPSMTATLLETLRELCPPRRKGQPDPLVYLNPESGSTYNFTESYYKRVLDDQAILGIDQQLRKSNDTEQITEEFAAGFKDLKKSFAESMYHMGNIRVLTGKQGEIRRNCRYTNKGNPN* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2396 340 Pfam Peroxidase 54 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 PANTHER PEROXIDASE 61-RELATED 22 333 - -
Apr2g2396 340 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 ProSiteProfiles Plant heme peroxidase family profile. 34 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 CDD secretory_peroxidase 38 334 IPR033905 GO:0004601|GO:0042744
Apr2g2396 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Apr2g2396 340 PANTHER PEROXIDASE 25-RELATED 22 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 Gene3D - 39 335 - -
Apr2g2396 340 SUPERFAMILY Heme-dependent peroxidases 37 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr2g2396 340 Gene3D Peroxidase, domain 2 169 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2396 Apr-Chr2 28628644 28630229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2396 9 338 Peroxidase AT5G24070 62.162 8.25e-153 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2396 K00430 - gmx:100797875 530.791