Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2392 ATGGATATAACTCCTTACACTTCAAAGAAACTAACATCACCACACTTGAGCGTTCACTCCAATAACCAGCATCAGAATAATATCGTTGATGAAGCTGCAGCCATAGACATGCACCGGAGCAACCATAGCCACACTTCCACAAGCCGTTCTTCTGACTCTAGTGAGCCTAGTGAGGATGGAAAATGGGCCCCAAAGCTTCTAAGAGAGTGTGCAAGAGCAATATCAGAGAGAGACTCAACAAAGATCCACCATCTTCTTTGGATGCTAAACGAGTTGGCTTCCCCTTATGGAGATTGTGATCAAAAACTAGCTTCTTACTTCTTGCAAGCTCTATTTTGCAAAGCCACAGAATCAGGCCAAAGATGTTACAAGACTCTATCTTCAGTGGCTGAGAAAAACCACTCTTTCGATTCAGCAAGAAAGTTAATACTCAAGTTTCAAGAGGTAAGCCCTTGGACAACCTTTGGACACGTGGCTTCCAACGGTGCAATTTTGGAAGCCTTAGAAGGGGAAACTAAGCTTCACATAGTTGATATCAGCAACACCCTTTGCACTCAGTGGCCTACTCTGTTGGAAGCCTTGGCCACAAGAAACGACGAAACTCCTCACTTGAAGCTCACAGTGGTGGCATTAACTGCTAGCGTAGTAGGATCAGTGATGAGGGAGGTTGGTCAACGAATGGAGAAGTTCGCAAGGCTCATGGGTGTGCCCTTTGAATTTAATGTGATTAGTGGGTTGAATCATCTCACCAAAGAGGGTCTTGGGGTTCAAGAAGATGAGGCTATAGCCGTGAATTGTGCTGGGGCGTTGAGAAGAGTTGAAGTGGAAGAGAGGGAAGCATTGATTCGTGTGTTCAAATCGCTTGGTCCTAAAGTTGTGACCGTTGTTGAGGAAGAAGCGGATTTTTGCAGCTCAAGTGATGACTTTGTGAAGAGTTTCGAAGAGTGTCTTAAGTTTTACACACTCTACTTTGAGATGTTGGAGGAGAGTTTCCCTCCAACGAGTAACGAGAGATTGATCTTGGAGAGGGAGTGTTCAAGGAGCATAGTTAGGGTTTTGGCTTGTAGTAGTGATGAATTTGAAGATGGTGAGTTATTGGGTGATTGTTGTGAGAGAAGGGAGAGAGGAACACAATGGAGTGAAAGGCTTAGGAACTCGTTTTCCCCAGCTGGGTTCAGTGATGATGTTGTGGATGATGTCAAAGCATTACTCAAGAGGTACCAACCAGGATGGTCTCTTATGGTGTCCCAAGGAGATGATCATCATGGAATTTACTTGACATGGAAAGAGGAACCAGTGGTGTGGGCATCAGCATGGAAACCCTAG 1326 0.4495 MDITPYTSKKLTSPHLSVHSNNQHQNNIVDEAAAIDMHRSNHSHTSTSRSSDSSEPSEDGKWAPKLLRECARAISERDSTKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKTLSSVAEKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHIVDISNTLCTQWPTLLEALATRNDETPHLKLTVVALTASVVGSVMREVGQRMEKFARLMGVPFEFNVISGLNHLTKEGLGVQEDEAIAVNCAGALRRVEVEEREALIRVFKSLGPKVVTVVEEEADFCSSSDDFVKSFEECLKFYTLYFEMLEESFPPTSNERLILERECSRSIVRVLACSSDEFEDGELLGDCCERRERGTQWSERLRNSFSPAGFSDDVVDDVKALLKRYQPGWSLMVSQGDDHHGIYLTWKEEPVVWASAWKP* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2392 441 Pfam GRAS domain family 65 440 IPR005202 -
Apr2g2392 441 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 440 IPR005202 -
Apr2g2392 441 MobiDBLite consensus disorder prediction 39 61 - -
Apr2g2392 441 ProSiteProfiles GRAS family profile. 54 440 IPR005202 -
Apr2g2392 441 PANTHER PROTEIN SHORT-ROOT-LIKE 38 440 - -
Apr2g2392 441 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2392 Apr-Chr2 28600620 28602014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2392 38 441 GRAS Transcription Factor Family AT4G37650 52.123 2.49e-148 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr2g2392 GRAS 6.8e-96 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2392 - - gmx:100818806 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2392 2 28600620 28602014 Apr2g2392 2 28600620 28602014 ECH
Apr2g2392 2 28600620 28602014 Apr2g2392 2 28600620 28602014 PCT