Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2387 ATGGATAAGGACAAATCTGTGGGTCATGGTGGAGGTTTGCCACCTCCATCGGGACGTTATTCAGGTTACTCTCCCACTGGAAGCGCCTTCAATGTGAAATCTGAACCGTCGTCGTCGTTACCTTATCTGCCATTGGCTCCGGGAACCAGTTCCGACTCTACTCATTTTGGGCATGGAATGTCCTCGGATTCTAGTGGCTTTAGTCATGATATTAGCAGAATGCCTGATAATCCCCCAAGGAATAGAGGTCATAGGCGTGCTCATTCTGAGATTCTCACCCTACCTGATGATATTAGTTTTGACAGTGACCTTGGTGTTGTTGGGGGTGCTGATGGGCCTTCGTTCTCTGATGATGCTGAGGAAGACTTGCTGTCGATGTACCTTGATATGGATAAATTCAATTCGTCATCAGCTACATCCACGTTTCAAATGGGCGAGCCGTCTAATTGTGCAGCAGCGTCGGCCACGGCACAATCAGTGGGAGTGCCCACCTCTTCTGCAGAAAACATTGTTATTGGTGCTAATGAAAGGCCCAGAGTAAGACACCAGCATAGTCAATCGATGGATGGGTCAACAACCATCAAACCTGAGATGCTGGTCTCAGGCTCAGAAGACGCGTCTGCAGCTGATTCTAAAAAAGCAATGTCAGCTGCCAAACTTGCTGAGCTTGCCTTAATTGACCCCAAACGTGCAAAAAGGATATGGGCAAATAGGCAGTCTGCTGCGAGGTCAAAAGAGAGGAAGATGCGATACATTGCTGAGCTTGAAAGGAAGGTGCAGACTTTGCAAACGGAAGCAACATCTTTATCTGCACAATTAACACTCTTGCAGAGAGATACAAACGGATTGAATTCTGAGAACAGTGAACTGAAGCTGCGATTGCAAACCATGGAACAACAAGTTCACTTGCAAGATGCGTTAAACGATGCATTAAAAGAGGAAATTCAGCATTTGAAATTACTGACCGGGCAAGCTATGCCACCTAATGGAGGACCTATGATGAACTTTGCTTCTTTTGGAGGGGGGCAGCAATTCTATCCCAGTAATCATGCCATGCACACCCTTTTAGCTGCACAACAGTTTCAACAGCTCCAAATTCATCCTCAGAAGCAGCAGCAGCATCAATTTCAGCAGCTTCAGCAACAACAAATGTTGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGGAACAACAGCACCAACAGTCAAGTGACTTGAAAATGAGAGCAGCCACACCTACTCCATGCCCCAAAGACAATGCTTCATCAGATGTAAATCCTTCAGGGGCCAAGGATTGTTGA 1302 0.4677 MDKDKSVGHGGGLPPPSGRYSGYSPTGSAFNVKSEPSSSLPYLPLAPGTSSDSTHFGHGMSSDSSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDAEEDLLSMYLDMDKFNSSSATSTFQMGEPSNCAAASATAQSVGVPTSSAENIVIGANERPRVRHQHSQSMDGSTTIKPEMLVSGSEDASAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKLLTGQAMPPNGGPMMNFASFGGGQQFYPSNHAMHTLLAAQQFQQLQIHPQKQQQHQFQQLQQQQMLQQQQQQQQQQQEQQHQQSSDLKMRAATPTPCPKDNASSDVNPSGAKDC* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2387 433 Gene3D - 228 301 - -
Apr2g2387 433 Coils Coil 379 399 - -
Apr2g2387 433 SUPERFAMILY Leucine zipper domain 229 280 IPR046347 GO:0003700|GO:0006355
Apr2g2387 433 MobiDBLite consensus disorder prediction 387 433 - -
Apr2g2387 433 Coils Coil 245 314 - -
Apr2g2387 433 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 227 290 IPR004827 GO:0003700|GO:0006355
Apr2g2387 433 Pfam bZIP transcription factor 229 287 IPR004827 GO:0003700|GO:0006355
Apr2g2387 433 MobiDBLite consensus disorder prediction 387 409 - -
Apr2g2387 433 MobiDBLite consensus disorder prediction 21 71 - -
Apr2g2387 433 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 375 - -
Apr2g2387 433 MobiDBLite consensus disorder prediction 1 86 - -
Apr2g2387 433 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 375 - -
Apr2g2387 433 CDD bZIP_plant_RF2 230 279 IPR044759 GO:0003700|GO:0006355
Apr2g2387 433 SMART brlzneu 225 289 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2387 Apr-Chr2 28556420 28560518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2387 19 358 bZIP Transcription Factor Family AT1G06070 73.235 7.24e-171 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr2g2387 bZIP_1 4.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2387 - - gmx:100786738 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2387 2 28556420 28560518 Apr2g2387 2 28556420 28560518 ECH
Apr2g2387 2 28556420 28560518 Apr5g0226 5 2055157 2057448 PCT