Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2379 ATGGAGTTTGGGATTGATGGCTCCATTAGTGCTGAGACAGTTGGCAATGCTACTGTGGGGGAGATTAATAGCAGCATAGCTGATGAAAACAAAGTGGGCTGCAGTTCTTTTAATCCTACTTATAAACAAGATCAAGATGATAATATAACTCAAGATTCTTCTGGAGGGGACACAATACCATCAGCAATTCCTGCAGTATCGGTTGTGTCAGCTGAAGAGCCCTATGTGGGTCAGGAGTTTGAATCGGAAGCTGCAGCTCATGCATTTTATAATGCATATGCTACACGTGTTGGATTCATCATACGTGTAAGTAAGCTCTCACGATCAAGGCGTGATGGATCTGCTATTGGACGAGCTCTTGTTTGCAATAGAGAAGGTTACAGAATGCCTGACAAGCGTGAAAAGATTGTAAGGCAAAGGGCAGAGACAAGGGTTGGTTGTAGGGCAATGATTTTGGTGAGGAAAGTAAGCTCTGGTAAATGGGTTGTTACGAAGTTTATAAAGGAACACACGCATCCTCTGACCCCTGGAAAAGGTAGAAGGGATTGCATTTATGAGCAGTATCCGTGGATGAAACACGGGAATCAATTGTGA 594 0.4343 MEFGIDGSISAETVGNATVGEINSSIADENKVGCSSFNPTYKQDQDDNITQDSSGGDTIPSAIPAVSVVSAEEPYVGQEFESEAAAHAFYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFIKEHTHPLTPGKGRRDCIYEQYPWMKHGNQL* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2379 197 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 189 - -
Apr2g2379 197 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 1 189 - -
Apr2g2379 197 Pfam FAR1 DNA-binding domain 89 175 IPR004330 -
Apr2g2379 197 MobiDBLite consensus disorder prediction 37 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2379 Apr-Chr2 28516605 28520900 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Apr2g2379 FAR1 1.9e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2379 - - gmx:100806900 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2379 2 28516605 28520900 Apr2g2379 2 28516605 28520900 ECH
Apr2g2379 2 28516605 28520900 Apr5g0220 5 2018914 2021374 PCT